You are querying gene by "AT1G53700".

Locus: AT1G53700 Alias: PK3AT

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - auxin polar transport 16460509

Basic gene information ( show / hide contents )

Locus AT1G53700 | Chromosome: 1 | Strand: +
Description auxin polar transport
Alias
PK3AT( alias )
WAG1( alias )
Gene model
AT1G53700.1 | From: 20052254 | To: 20053783
Sequence
AT1G53700.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein serine/threonine kinase activity PMID: 16460509
kinase activity PMID: 13678909
cellular_component
cellular_component_unknown PMID:
biological_process
auxin polar transport PMID: 16460509
root development PMID: 16460509
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G53700.1 
length: 1530 
miRNA : ath-miR861-5p
length: 21 
 
mfe: -24.8 kcal/mol 
p-value: 0.008139 
 
position  821 
target 5' G    G             C  A 
           UGGC GU UGUUUCUCCA GG  
           ACUG CG AUAAAGAGGU CC  
miRNA  3' A       U          U    
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_69775
AccessionTaxon
NP_175774 ( AT1G53700 )Arabidopsis thaliana
NP_188054Arabidopsis thaliana
NP_001049578Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF561124.8E-7868427IPR011009Protein kinase-like domain
PfamPF000695.500000000000002E-3093244IPR017442Serine/threonine-protein kinase-like domain
SMARTSM002202.1999990098070714E-7993400IPR002290Serine/threonine-protein kinase domain
PROSITEPS500110.093400IPR000719Protein kinase, catalytic domain
PROSITEPS001080.0215227IPR008271Serine/threonine-protein kinase, active site
PfamPF000692.6000000000000003E-17295400IPR017442Serine/threonine-protein kinase-like domain