You are querying gene by "AT1G53170".

Locus: AT1G53170 Alias: ATERF-8

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - ethylene mediated signaling pathway 9687012

Basic gene information ( show / hide contents )

Locus AT1G53170 | Chromosome: 1 | Strand: -
Description ethylene mediated signaling pathway
Alias
ATERF-8( alias )
ATERF8( alias )
ERF8( alias )
Gene model
AT1G53170.1 | From: 19825005 | To: 19825920
Sequence
AT1G53170.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID: 11487705
transcription repressor activity PMID: 11487705
transcription factor activity PMID: 11487705
cellular_component
nucleus PMID: 11487705
biological_process
ethylene mediated signaling pathway PMID: 9687012
regulation of transcription, DNA-dependent PMID: 11487705
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G53170.1 
length: 916 
miRNA : ath-miR2935
length: 22 
 
mfe: -32.3 kcal/mol 
p-value: 0.000256 
 
position  590 
target 5' A                 G    G 
           GAUGACGA CGUGUGGU UCCA  
           UUACUGCU GCACACUA AGGU  
miRNA  3' C        G               
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_23266
AccessionTaxon
NP_174158Arabidopsis thaliana
NP_001055941Oryza sativa Japonica Group
30190.m011323Ricinus communis
NP_175725 ( AT1G53170 )Arabidopsis thaliana
NP_188139Arabidopsis thaliana
NP_001044519Oryza sativa Japonica Group
NP_001055942Oryza sativa Japonica Group
27904.m000217Ricinus communis
205920Chlamydomonas reinhardtii
e_gw1.124.59.1Physcomitrella patens subsp. patens
e_gw1.149.152.1Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1270048Physcomitrella patens subsp. patens
gw1.105.71.1Physcomitrella patens subsp. patens
gw1.90.191.1Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.30.730.109.300000484759621E-222990IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541712.8E-222990IPR016177DNA-binding, integrase-type
PfamPF008476.200000000000002E-133079IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SMARTSM003808.599987762395442E-353093IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PROSITEPS510320.03087IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003673.500002354343142E-113142IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003673.500002354343142E-115369IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding