You are querying gene by "AT1G51500".

Locus: AT1G51500 Alias: ABCG12

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT1G51500 | Chromosome: 1 | Strand: -
Description Encodes an ABC transporter involved in cuticular wax biosynthesis. Lines carrying recessive mutations in this locus have weakly glaucous stem surface, and relative elevated secondary alcohols and ketones.
Alias
ABCG12( alias )
CER5( alias )
D3( alias )
WBC12( alias )
Gene model
AT1G51500.1 | From: 19101465 | To: 19104747
Sequence
AT1G51500.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
ATPase activity, coupled to transmembrane movement of substances PMID:
biological_process
wax biosynthetic process PMID: 11336252
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G51500.1 
length: 2342 
miRNA : ath-miR2111a*
length: 21 
 
mfe: -31.6 kcal/mol 
p-value: 0.007716 
 
position  588 
target 5' A       G       A     G 
           GGUAAUU GCAUUCU GAGGA  
           CCAUUAG CGUAGGG CUCCU  
miRNA  3'         G             G 
 
 
target: AT1G51500.1 
length: 2342 
miRNA : ath-miR780.2
length: 21 
 
mfe: -25.7 kcal/mol 
p-value: 0.014202 
 
position  1841 
target 5' U  A  C               A 
           UG CC GAUGUUUGCGGGGGA  
           AC GG CUAUAAGUGCUUCUU  
miRNA  3' U     U                 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_13118
AccessionTaxon
NP_001059389Oryza sativa Japonica Group
NP_001062680Oryza sativa Japonica Group
NP_001063446Oryza sativa Japonica Group
NP_001063447Oryza sativa Japonica Group
NP_001066642Oryza sativa Japonica Group
NP_001066644Oryza sativa Japonica Group
NP_173226Arabidopsis thaliana
NP_175557Arabidopsis thaliana
NP_175561 ( AT1G51500 )Arabidopsis thaliana
NP_188746Arabidopsis thaliana
estExt_fgenesh1_pg.C_Chr_09.00010123Ostreococcus tauri
e_gw1.248.47.1Physcomitrella patens subsp. patens
e_gw1.330.15.1Physcomitrella patens subsp. patens
e_gw1.337.34.1Physcomitrella patens subsp. patens
e_gw1.89.107.1Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_317000002Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_32000143Physcomitrella patens subsp. patens
fgenesh1_pm.scaffold_198000013Physcomitrella patens subsp. patens
142001Chlamydomonas reinhardtii
29681.m001373Ricinus communis
29772.m000319Ricinus communis
29806.m000948Ricinus communis
NP_001053375Oryza sativa Japonica Group
NP_001054952Oryza sativa Japonica Group
NP_001064944Oryza sativa Japonica Group
30006.m000290Ricinus communis
30169.m006465Ricinus communis
30169.m006466Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS508930.024269IPR003439ABC transporter-like
SMARTSM003829.699996633901118E-1154246IPR003593ATPase, AAA+ type, core
PfamPF000051.3999999999999998E-1069196IPR003439ABC transporter-like
PROSITEPS002110.0168182IPR017871ABC transporter, conserved site
PfamPF010611.9999999999999943E-27362570IPR013525ABC-2 type transporter