You are querying gene by "AT1G50430".

Locus: AT1G50430 Alias: 7RED

Hormone Evidence Function category Gene Description PMID
brassinosteroidGeneOntology - brassinosteroid biosynthetic process 10758495

Basic gene information ( show / hide contents )

Locus AT1G50430 | Chromosome: 1 | Strand: -
Description brassinosteroid biosynthetic process
Alias
7RED( alias )
DWF5( alias )
LE( alias )
PA( alias )
ST7R( alias )
Gene model
AT1G50430.1 | From: 18685600 | To: 18689318
AT1G50430.2 | From: 18685600 | To: 18689318
Sequence
AT1G50430.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G50430.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
sterol delta7 reductase activity PMID: 10758495
cellular_component
integral to endoplasmic reticulum membrane PMID: 8631902
biological_process
unidimensional cell growth PMID: 10758495
sterol biosynthetic process PMID: 10758495
brassinosteroid biosynthetic process PMID: 10758495
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Biosynthesis of steroids 7-dehydrocholesterol reductase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G50430.1 
length: 1639 
miRNA : ath-miR2937
length: 21 
 
mfe: -24.5 kcal/mol 
p-value: 0.039890 
 
position  702 
target 5' U   G    G           C 
           GAU UCUU GGCAGUUCUUG  
           CUG GGAA UUGUCGAGAAU  
miRNA  3'     A    G           A 
 
 
target: AT1G50430.2 
length: 1634 
miRNA : ath-miR2937
length: 21 
 
mfe: -24.5 kcal/mol 
p-value: 0.039767 
 
position  697 
target 5' U   G    G           C 
           GAU UCUU GGCAGUUCUUG  
           CUG GGAA UUGUCGAGAAU  
miRNA  3'     A    G           A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_16688
AccessionTaxon
30169.m006262Ricinus communis
NP_001046809Oryza sativa Japonica Group
NP_001077693Arabidopsis thaliana
NP_175460 ( AT1G50430 )Arabidopsis thaliana
estExt_fgenesh1_pm.C_160008Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF012223.8e-8562432IPR001171Ergosterol biosynthesis ERG4/ERG24
PfamPF012221.9999999999999945E-8162431IPR001171Ergosterol biosynthesis ERG4/ERG24
PROSITEPS010170.0169184IPR018083Sterol reductase, conserved site
PROSITEPS01017NA170185IPR018083Sterol reductase, conserved site
PROSITEPS010180.0395418IPR018083Sterol reductase, conserved site
PROSITEPS01018NA396419IPR018083Sterol reductase, conserved site