You are querying gene by "AT1G49430".

Locus: AT1G49430 Alias: LACS2

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT1G49430 | Chromosome: 1 | Strand: +
Description Encodes a long chain acyl-CoA synthetase that catalyzes the synthesis of omega-hydroxy fatty acyl-CoA intermediates in the pathway to cutin synthesis. Required for repression of lateral root formation.
Alias
LACS2( alias )
Gene model
AT1G49430.1 | From: 18294711 | To: 18299493
Sequence
AT1G49430.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
long-chain-fatty-acid-CoA ligase activity PMID: 14973169
cellular_component
cellular_component_unknown PMID:
biological_process
defense response to fungus PMID: 17396154
cutin biosynthetic process PMID: 14973169
fatty acid biosynthetic process PMID: 9106514
KEGG pathway This gene participates in 4 pathways:
Pathway Enzyme
Fatty acid metabolism long-chain fatty-acid-CoA ligase
Other transporters long-chain fatty-acid-CoA ligase
Adipocytokine signaling pathway long-chain fatty-acid-CoA ligase
PPAR signaling pathway long-chain fatty-acid-CoA ligase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10070
AccessionTaxon
NP_198112Arabidopsis thaliana
NP_566265Arabidopsis thaliana
123147Chlamydomonas reinhardtii
NP_001065739Oryza sativa Japonica Group
NP_001066139Oryza sativa Japonica Group
1200010108Ostreococcus tauri
estExt_Genewise1.C_4080008Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_120133Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_33000081Physcomitrella patens subsp. patens
29844.m003365Ricinus communis
30128.m008777Ricinus communis
NP_177882Arabidopsis thaliana
NP_178516Arabidopsis thaliana
NP_849934Arabidopsis thaliana
NP_001055177Oryza sativa Japonica Group
NP_001066256Oryza sativa Japonica Group
fgenesh1_pm.C_Chr_05.0001000004Ostreococcus tauri
e_gw1.186.23.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_4750023Physcomitrella patens subsp. patens
29732.m000322Ricinus communis
29908.m006186Ricinus communis
e_gw1.108.73.1Physcomitrella patens subsp. patens
e_gw1.113.15.1Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2180009Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_470140Physcomitrella patens subsp. patens
NP_001065854Oryza sativa Japonica Group
NP_001031554Arabidopsis thaliana
NP_176622Arabidopsis thaliana
NP_182246Arabidopsis thaliana
NP_192841Arabidopsis thaliana
NP_194116Arabidopsis thaliana
NP_001043753Oryza sativa Japonica Group
NP_001043879Oryza sativa Japonica Group
NP_001054556Oryza sativa Japonica Group
NP_001056862Oryza sativa Japonica Group
NP_001068097Oryza sativa Japonica Group
29851.m002473Ricinus communis
30076.m004616Ricinus communis
30190.m010831Ricinus communis
NP_175368 ( AT1G49430 )Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF005012.200000000000019E-9981551IPR000873AMP-dependent synthetase/ligase
PROSITEPS004550.0228239IPR020845AMP-binding, conserved site