You are querying gene by "AT1G48630".

Locus: AT1G48630 Alias: RACK1B

Hormone Evidence Function category Gene Description PMID
abscisic acidMutant Hormone signal transduction Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1B has no phenotype on its own and probably acts redundantly with RACK1A and RACK1C. 19584117

Basic gene information ( show / hide contents )

Locus AT1G48630 | Chromosome: 1 | Strand: -
Description Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1B has no phenotype on its own and probably acts redundantly with RACK1A and RACK1C.
Alias
RACK1B( alias )
Gene model
AT1G48630.1 | From: 17985446 | To: 17986995
Sequence
AT1G48630.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
nucleotide binding PMID:
cellular_component
cellular_component_unknown PMID:
biological_process
biological_process_unknown PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
rack1a-1 rack1b-2 19584117 mutant
rack1a-1 rack1c-2 19584117 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11021
AccessionTaxon
NP_173248Arabidopsis thaliana
NP_175296 ( AT1G48630 )Arabidopsis thaliana
NP_188441Arabidopsis thaliana
105734Chlamydomonas reinhardtii
NP_001043910Oryza sativa Japonica Group
NP_001056254Oryza sativa Japonica Group
estExt_fgenesh1_pm.C_Chr_13.00010026Ostreococcus tauri
estExt_Genewise1.C_2590023Physcomitrella patens subsp. patens
estExt_Genewise1.C_2760003Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_150112Physcomitrella patens subsp. patens
29654.m000305Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF509782.2E-722321IPR011046WD40 repeat-like-containing domain
SMARTSM003200.008000000242428033444IPR001680WD40 repeat
Gene3DG3DSA:2.130.10.105.699997087840025E-727321IPR015943WD40/YVTN repeat-like-containing domain
PfamPF004000.07200000000000001744IPR019781WD40 repeat, subgroup
PROSITEPS500820.01153IPR019782WD40 repeat 2
PROSITEPS502940.011326IPR017986WD40-repeat-containing domain
SMARTSM003202.0000007521745652E-55291IPR001680WD40 repeat
PfamPF004009.100000000000008E-55691IPR019781WD40 repeat, subgroup
PROSITEPS500820.059100IPR019782WD40 repeat 2
PROSITEPS006780.07892IPR019775WD40 repeat, conserved site
SMARTSM003205.2999965755018866E-1194133IPR001680WD40 repeat
PfamPF004001.9E-895133IPR019781WD40 repeat, subgroup
PROSITEPS500820.0101133IPR019782WD40 repeat 2
PRINTSPR003201.4000004576398235E-8120134IPR020472G-protein beta WD-40 repeat, region
PROSITEPS006780.0120134IPR019775WD40 repeat, conserved site
SMARTSM003204.100000492084246E-8135179IPR001680WD40 repeat
PROSITEPS500820.0145188IPR019782WD40 repeat 2
PfamPF004001.9E-7146179IPR019781WD40 repeat, subgroup
PRINTSPR003201.4000004576398235E-8166180IPR020472G-protein beta WD-40 repeat, region
PROSITEPS006780.0166180IPR019775WD40 repeat, conserved site
SMARTSM003207.899996098894172E-10182221IPR001680WD40 repeat
PfamPF004001.0E-5185221IPR019781WD40 repeat, subgroup
PROSITEPS500820.0189230IPR019782WD40 repeat 2
PRINTSPR003201.4000004576398235E-8208222IPR020472G-protein beta WD-40 repeat, region
PROSITEPS006780.0208222IPR019775WD40 repeat, conserved site
SMARTSM003200.0042000000191072615224261IPR001680WD40 repeat
PfamPF004000.4226261IPR019781WD40 repeat, subgroup
PROSITEPS500820.0237270IPR019782WD40 repeat 2
SMARTSM003200.18000000106278666288322IPR001680WD40 repeat
PfamPF004000.079297321IPR019781WD40 repeat, subgroup
PROSITEPS500820.0298326IPR019782WD40 repeat 2