You are querying gene by "AT1G48410".

Locus: AT1G48410 Alias: AGO1

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - response to auxin stimulus 15829601

Basic gene information ( show / hide contents )

Locus AT1G48410 | Chromosome: 1 | Strand: -
Description response to auxin stimulus
AGO1( alias )
Gene model
AT1G48410.1 | From: 17889766 | To: 17896254
AT1G48410.2 | From: 17889766 | To: 17896254
AT1G48410.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G48410.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
siRNA binding PMID: 16081530
endoribonuclease activity PMID: 16081530
protein binding PMID: 17869109
miRNA binding PMID: 16081530
nucleus PMID: 17442570
cytoplasm PMID: 9427751
response to auxin stimulus PMID: 15829601
RNA interference PMID: 17558406
adventitious root development PMID: 15829601
virus induced gene silencing PMID: 17158744
leaf morphogenesis PMID: 9427751
auxin metabolic process PMID: 15829601
posttranscriptional gene silencing PMID: 11910010
response to far red light PMID: 15829601
gene silencing by miRNA PMID: 15131082
embryonic development ending in seed dormancy PMID: 9876176
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT1G48410.1 
length: 3501 
miRNA : ath-miR773
length: 21 
mfe: -26.2 kcal/mol 
p-value: 0.044580 
position  991 
target 5' A                U    G 
miRNA  3' C  U                    
target: AT1G48410.1 
length: 3501 
miRNA : ath-miR843
length: 21 
mfe: -25.3 kcal/mol 
p-value: 0.072178 
position  2099 
target 5' A     C  U     C      C 
miRNA  3' A     C        U        
target: AT1G48410.2 
length: 3507 
miRNA : ath-miR773
length: 21 
mfe: -26.2 kcal/mol 
p-value: 0.044653 
position  991 
target 5' A                U    G 
miRNA  3' C  U                    
target: AT1G48410.2 
length: 3507 
miRNA : ath-miR843
length: 21 
mfe: -25.3 kcal/mol 
p-value: 0.072309 
position  2105 
target 5' A     C  U     C      C 
miRNA  3' A     C        U        

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10780
NP_175274 ( AT1G48410 )Arabidopsis thaliana
NP_199194Arabidopsis thaliana
NP_849784Arabidopsis thaliana
NP_850110Arabidopsis thaliana
18730Chlamydomonas reinhardtii
NP_001046021Oryza sativa Japonica Group
NP_001047704Oryza sativa Japonica Group
NP_001048621Oryza sativa Japonica Group
NP_001050910Oryza sativa Japonica Group
NP_001050911Oryza sativa Japonica Group
NP_001051583Oryza sativa Japonica Group
NP_001053581Oryza sativa Japonica Group
NP_001057988Oryza sativa Japonica Group
NP_001058648Oryza sativa Japonica Group
NP_001059079Oryza sativa Japonica Group
NP_001059609Oryza sativa Japonica Group
e_gw1.173.6.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_280130Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_70098Physcomitrella patens subsp. patens
29589.m001295Ricinus communis
29677.m000188Ricinus communis
29807.m000479Ricinus communis
29844.m003212Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF086999.5e-24334386IPR014811Domain of unknown function DUF1785
PfamPF086997.499999999999999E-21336388IPR014811Domain of unknown function DUF1785
PfamPF021701.5e-34388523IPR003100Argonaute/Dicer protein, PAZ
PfamPF021701.2000000000000005E-31390525IPR003100Argonaute/Dicer protein, PAZ
PROSITEPS5082134.025391501IPR003100Argonaute/Dicer protein, PAZ
PROSITEPS508210.0393503IPR003100Argonaute/Dicer protein, PAZ
SuperFamilySSF530982.6e-23622989IPR012337Polynucleotidyl transferase, ribonuclease H fold
SuperFamilySSF530982.6E-23624991IPR012337Polynucleotidyl transferase, ribonuclease H fold
PROSITEPS5082259.906676997IPR003165Stem cell self-renewal protein Piwi
PfamPF021713.5e-112677996IPR003165Stem cell self-renewal protein Piwi
PROSITEPS508220.0678999IPR003165Stem cell self-renewal protein Piwi
PfamPF021712.7999999999999407E-109679998IPR003165Stem cell self-renewal protein Piwi