You are querying gene by "AT1G45249".

Locus: AT1G45249 Alias: ABF2

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 16463099

Basic gene information ( show / hide contents )

Locus AT1G45249 | Chromosome: 1 | Strand: -
Description response to abscisic acid stimulus
Alias
ABF2( alias )
AREB1( alias )
Gene model
AT1G45249.1 | From: 17167567 | To: 17170295
AT1G45249.2 | From: 17168575 | To: 17170295
Sequence
AT1G45249.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G45249.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID: 11005831
protein binding PMID: 16299177
transcription factor activity PMID: 11906833
transcription activator activity PMID: 11005831
cellular_component
nucleus PMID: 16284313
biological_process
glucose mediated signaling PMID: 15361142
response to water deprivation PMID: 16284313
abscisic acid mediated signaling PMID: 11005831
response to salt stress PMID: 16463099
response to abscisic acid stimulus PMID: 16463099
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G45249.1 
length: 1674 
miRNA : ath-miR414
length: 21 
 
mfe: -30.2 kcal/mol 
p-value: 0.000724 
 
position  167 
target 5' G                    A 
           GA GAUGGUGGUGGAGGUGG  
           CU CUACUACUACUUCUACU  
miRNA  3' A  G                   
 
 
target: AT1G45249.1 
length: 1674 
miRNA : ath-miR843
length: 21 
 
mfe: -24.8 kcal/mol 
p-value: 0.040005 
 
position  1211 
target 5' A             A G     G 
           CC GUGGAGCUUG A CUGAA  
           GG UACUUCGAGC U GAUUU  
miRNA  3' A  U            G       
 
 
target: AT1G45249.2 
length: 1400 
miRNA : ath-miR414
length: 21 
 
mfe: -30.2 kcal/mol 
p-value: 0.000565 
 
position  156 
target 5' G                    A 
           GA GAUGGUGGUGGAGGUGG  
           CU CUACUACUACUUCUACU  
miRNA  3' A  G                   
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_24368
AccessionTaxon
NP_001154626Arabidopsis thaliana
NP_564551Arabidopsis thaliana
NP_566629Arabidopsis thaliana
gw1.9.244.1Physcomitrella patens subsp. patens
29801.m003176Ricinus communis
30170.m013868Ricinus communis
NP_849777 ( AT1G45249 )Arabidopsis thaliana
NP_973981Arabidopsis thaliana
NP_001048225Oryza sativa Japonica Group
NP_001057118Oryza sativa Japonica Group
NP_001063362Oryza sativa Japonica Group
NP_001062018Oryza sativa Japonica Group
141909Chlamydomonas reinhardtii
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SMARTSM003380.04600000443308619334397IPR004827Basic-leucine zipper (bZIP) transcription factor
SMARTSM003381.4e-13334398IPR004827Basic-leucine zipper (bZIP) transcription factor
PROSITEPS5021711.381336399IPR004827Basic-leucine zipper (bZIP) transcription factor
PfamPF001701.8e-12338391IPR011616bZIP transcription factor, bZIP-1
PROSITEPS000360.0341356IPR004827Basic-leucine zipper (bZIP) transcription factor
PROSITEPS00036NA341356IPR004827Basic-leucine zipper (bZIP) transcription factor