You are querying gene by "AT1G33410".

Locus: AT1G33410 Alias: SAR1

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - response to auxin stimulus 16751346

Basic gene information ( show / hide contents )

Locus AT1G33410 | Chromosome: 1 | Strand: -
Description response to auxin stimulus
Alias
SAR1( alias )
Gene model
AT1G33410.1 | From: 12109600 | To: 12118808
Sequence
AT1G33410.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
cellular_component
nuclear membrane PMID: 16751346
biological_process
mRNA export from nucleus PMID: 16751346
developmental process PMID: 16751346
response to auxin stimulus PMID: 16751346
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G33410.1 
length: 4559 
miRNA : ath-miR2111a
length: 21 
 
mfe: -25.0 kcal/mol 
p-value: 0.087717 
 
position  1014 
target 5' G     G       U      U 
           GAAUU CGGGAUG CAGAUU  
           UUUGG GUCCUAC GUCUAA  
miRNA  3' A     A              U 
 
 
target: AT1G33410.1 
length: 4559 
miRNA : ath-miR2111b
length: 21 
 
mfe: -25.0 kcal/mol 
p-value: 0.082078 
 
position  1014 
target 5' G     G       U      U 
           GAAUU CGGGAUG CAGAUU  
           UUUGG GUCCUAC GUCUAA  
miRNA  3' A     A              U 
 
 
target: AT1G33410.1 
length: 4559 
miRNA : ath-miR834
length: 21 
 
mfe: -28.1 kcal/mol 
p-value: 0.035871 
 
position  2660 
target 5' A     U        U      G 
           UGCCA CCGCUGCU CU UCA  
           AUGGU GGCGAUGA GA GGU  
miRNA  3' A              C  U     
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_15572
AccessionTaxon
NP_174607 ( AT1G33410 )Arabidopsis thaliana
NP_001045864Oryza sativa Japonica Group
estExt_fgenesh1_pg.C_3320022Physcomitrella patens subsp. patens
27894.m000798Ricinus communis
1500010063Ostreococcus tauri
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF117151.2000000000000144E-6628494IPR021717Nucleoporin Nup120/160