You are querying gene by "AT1G31880".

Locus: AT1G31880 Alias: BRX

Hormone Evidence Function category Gene Description PMID
CytokininMutant Hormone signal transduction Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict (Li et al. Planta 2009:229(3):593-603), shows enhanced response to ABA-mediated inhibition of root growth. 19037657
BrassinosteroidMutant Hormone signal transduction Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict (Li et al. Planta 2009:229(3):593-603), shows enhanced response to ABA-mediated inhibition of root growth. 19037657

Basic gene information ( show / hide contents )

Locus AT1G31880 | Chromosome: 1 | Strand: +
Description Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict (Li et al. Planta 2009:229(3):593-603), shows enhanced response to ABA-mediated inhibition of root growth.
Alias
BRX( alias )
NIP3;1( alias )
NLM9( alias )
Gene model
AT1G31880.1 | From: 11445470 | To: 11450169
Sequence
AT1G31880.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
water channel activity PMID:
identical protein binding PMID: 16514016
cellular_component
nucleus PMID: 15031265
biological_process
root development PMID: 11500536
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

  cytokinin     Brassinosteroid  

[   cytokinin   ]

Genotype PMID Type
brx-2 19037657 mutant

[   Brassinosteroid   ]

Genotype PMID Type
brx-2 19037657 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G31880.1 
length: 1574 
miRNA : ath-miR830*
length: 22 
 
mfe: -23.4 kcal/mol 
p-value: 0.008859 
 
position  1357 
target 5' C    G G   G           U 
           AGCC G AAC GUUUGGGGAAG  
           UUGG U UUG UAAACCUCUUC  
miRNA  3'      A     A           U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_69724
AccessionTaxon
NP_174471 ( AT1G31880 )Arabidopsis thaliana
NP_565809Arabidopsis thaliana
29827.m002586Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF083813.7E-16159193IPR013591Disease resistance/zinc finger/chromosome condensation-like region
PfamPF083811.1E-15308343IPR013591Disease resistance/zinc finger/chromosome condensation-like region