You are querying gene by "AT1G30040".

Locus: AT1G30040 Alias: ATGA2OX2

Hormone Evidence Function category Gene Description PMID
gibberellinGeneOntology - gibberellin 2-beta-dioxygenase activity 10200325

Basic gene information ( show / hide contents )

Locus AT1G30040 | Chromosome: 1 | Strand: +
Description gibberellin 2-beta-dioxygenase activity
Alias
ATGA2OX2( alias )
Gene model
AT1G30040.1 | From: 10537632 | To: 10539815
AT1G30040.2 | From: 10537632 | To: 10539172
Sequence
AT1G30040.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G30040.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
gibberellin 2-beta-dioxygenase activity PMID: 10200325
biological_process
gibberellin catabolic process PMID: 10200325
response to red light PMID: 17449805
response to red or far red light PMID: 17010113
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Diterpenoid biosynthesis gibberellin 2-oxidase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G30040.1 
length: 1408 
miRNA : ath-miR414
length: 21 
 
mfe: -27.0 kcal/mol 
p-value: 0.002653 
 
position  708 
target 5' C  A  A              G 
           GG GA GAUGGUGAAGGUGG  
           CU CU CUACUACUUCUACU  
miRNA  3' A  G  A                
 
 
target: AT1G30040.2 
length: 1335 
miRNA : ath-miR414
length: 21 
 
mfe: -27.0 kcal/mol 
p-value: 0.002480 
 
position  708 
target 5' C  A  A              G 
           GG GA GAUGGUGAAGGUGG  
           CU CU CUACUACUUCUACU  
miRNA  3' A  G  A                
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_51074
AccessionTaxon
NP_001031112Arabidopsis thaliana
NP_174296 ( AT1G30040 )Arabidopsis thaliana
NP_001044292Oryza sativa Japonica Group
29693.m002012Ricinus communis
NP_181002Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PRINTSPR006826.9e-054562IPR002283Isopenicillin N synthase
PfamPF031714.599999999999999E-10181253IPR005123Oxoglutarate/iron-dependent oxygenase
PfamPF031714.4e-27181281IPR005123Oxoglutarate/iron-dependent oxygenase
PRINTSPR006826.9e-05243269IPR002283Isopenicillin N synthase