You are querying gene by "AT1G27730".

Locus: AT1G27730 Alias: STZ

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 15333755

Basic gene information ( show / hide contents )

Locus AT1G27730 | Chromosome: 1 | Strand: -
Description response to abscisic acid stimulus
Alias
STZ( alias )
ZAT10( alias )
Gene model
AT1G27730.1 | From: 9648128 | To: 9649060
Sequence
AT1G27730.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
zinc ion binding PMID:
transcription repressor activity PMID: 15333755
transcription factor activity PMID: 8662738
nucleic acid binding PMID:
cellular_component
nucleus PMID: 15333755
biological_process
response to high light intensity PMID: 18156220
response to wounding PMID: 16258017
response to water deprivation PMID: 15333755
response to cold PMID: 15333755
response to abscisic acid stimulus PMID: 15333755
multicellular organism growth PMID: 15333755
response to oxidative stress PMID: 18156220
response to chitin PMID: 15923325
response to salt stress PMID: 8662738
photoprotection PMID: 18156220
photosynthesis PMID: 18156220
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G27730.1 
length: 933 
miRNA : ath-miR166a
length: 21 
 
mfe: -29.6 kcal/mol 
p-value: 0.006620 
 
position  726 
target 5' C  C           C       C 
           GG GAA GAAGCCU GGUUUGA  
           CC CUU CUUCGGA CCAGGCU  
miRNA  3' C      A                 
 
 
target: AT1G27730.1 
length: 933 
miRNA : ath-miR166b
length: 21 
 
mfe: -29.6 kcal/mol 
p-value: 0.003842 
 
position  726 
target 5' C  C           C       C 
           GG GAA GAAGCCU GGUUUGA  
           CC CUU CUUCGGA CCAGGCU  
miRNA  3' C      A                 
 
 
target: AT1G27730.1 
length: 933 
miRNA : ath-miR166c
length: 21 
 
mfe: -29.6 kcal/mol 
p-value: 0.004487 
 
position  726 
target 5' C  C           C       C 
           GG GAA GAAGCCU GGUUUGA  
           CC CUU CUUCGGA CCAGGCU  
miRNA  3' C      A                 
 
 
target: AT1G27730.1 
length: 933 
miRNA : ath-miR166d
length: 21 
 
mfe: -29.6 kcal/mol 
p-value: 0.004191 
 
position  726 
target 5' C  C           C       C 
           GG GAA GAAGCCU GGUUUGA  
           CC CUU CUUCGGA CCAGGCU  
miRNA  3' C      A                 
 
 
target: AT1G27730.1 
length: 933 
miRNA : ath-miR166e
length: 21 
 
mfe: -29.6 kcal/mol 
p-value: 0.003516 
 
position  726 
target 5' C  C           C       C 
           GG GAA GAAGCCU GGUUUGA  
           CC CUU CUUCGGA CCAGGCU  
miRNA  3' C      A                 
 
 
target: AT1G27730.1 
length: 933 
miRNA : ath-miR166f
length: 21 
 
mfe: -29.6 kcal/mol 
p-value: 0.002896 
 
position  726 
target 5' C  C           C       C 
           GG GAA GAAGCCU GGUUUGA  
           CC CUU CUUCGGA CCAGGCU  
miRNA  3' C      A                 
 
 
target: AT1G27730.1 
length: 933 
miRNA : ath-miR166g
length: 21 
 
mfe: -29.6 kcal/mol 
p-value: 0.004278 
 
position  726 
target 5' C  C           C       C 
           GG GAA GAAGCCU GGUUUGA  
           CC CUU CUUCGGA CCAGGCU  
miRNA  3' C      A                 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_30056
AccessionTaxon
NP_001051366Oryza sativa Japonica Group
NP_001118663Arabidopsis thaliana
NP_188592Arabidopsis thaliana
NP_001050650Oryza sativa Japonica Group
NP_001067148Oryza sativa Japonica Group
28152.m000908Ricinus communis
30170.m013751Ricinus communis
NP_174094 ( AT1G27730 )Arabidopsis thaliana
NP_196054Arabidopsis thaliana
NP_199131Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SMARTSM003550.002599999467189946480102IPR015880Zinc finger, C2H2-like
PROSITEPS501570.080107IPR007087Zinc finger, C2H2-type
PROSITEPS000280.082102IPR007087Zinc finger, C2H2-type
SMARTSM003550.031000003099112244136158IPR015880Zinc finger, C2H2-like
PROSITEPS501570.0136163IPR007087Zinc finger, C2H2-type
PROSITEPS000280.0138158IPR007087Zinc finger, C2H2-type