You are querying gene by "AT1G25490".

Locus: AT1G25490 Alias: ATB BETA BETA

Hormone Evidence Function category Gene Description PMID
ethyleneMutant Hormone signal transduction Enhanced Ethylene Response 1,activate EIN2 but not require ethylene signaling 11161061 16798939
GeneOntology - response to ethylene stimulus 11161061
auxinGeneOntology - auxin polar transport 11449059
abscisic acidMutant Hormone signal transduction RCN1 (ROOTS CURL IN NPA); a PP2A regulatory A subunit. 8641277 12417706
GeneOntology - positive regulation of abscisic acid mediated signaling 0012417706

Basic gene information ( show / hide contents )

Locus AT1G25490 | Chromosome: 1 | Strand: +
Description Enhanced Ethylene Response 1,activate EIN2 but not require ethylene signaling
Alias
ATB BETA BETA( alias )
EER1( alias )
RCN1( alias )
REGA( alias )
Gene model
AT1G25490.1 | From: 8951189 | To: 8955094
Sequence
AT1G25490.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein phosphatase type 2A regulator activity PMID: 8641277
cellular_component
protein phosphatase type 2A complex PMID: 8641277
biological_process
positive regulation of abscisic acid mediated signaling PMID: 0012417706
auxin polar transport PMID: 11449059
abscisic acid mediated signaling PMID: 0012417706
regulation of stomatal movement PMID: 0012417706
response to ethylene stimulus PMID: 11161061
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

  ethylene     abscisic acid  

[   ethylene   ]

Genotype PMID Type
eer1 11161061 mutant
eer1 etr1-1 11161061 mutant
eer1 ctr1-3 11161061 mutant
eer1 ein2-1 11161061 mutant
rcn1-2 ein2-1 16798939 mutant
rcn1-2 etr1-1 16798939 mutant
rcn1 8641277 12417706 mutant

[   abscisic acid   ]

Genotype PMID Type
rcn1 8641277 12417706 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G25490.1 
length: 2110 
miRNA : ath-miR2112-5p
length: 21 
 
mfe: -23.3 kcal/mol 
p-value: 0.019474 
 
position  1831 
target 5' G              U  U    A 
           AUGUUGAUGUUCGU AU UUGC  
           UGUAACUAUAGGCG UA AACG  
miRNA  3'                        C 
 
 
target: AT1G25490.1 
length: 2110 
miRNA : ath-miR857
length: 21 
 
mfe: -21.3 kcal/mol 
p-value: 0.129128 
 
position  1254 
target 5' U               C     C 
           GUGCGCCU UAACAU AUAAG  
           UAUGUGGA GUUGUA UGUUU  
miRNA  3'          A            U 
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT1G25490AT1G04310negativemodification PN/Amutance11161061
AT1G25490AT1G66340negativemodification PN/Amutance11161061
AT1G25490AT2G40940negativemodification PN/Amutance11161061
AT1G25490AT3G04580negativemodification PN/Amutance11161061
AT1G25490AT3G23150negativemodification PN/Amutance11161061
AT1G25490AT4G33950negativemodification PN/Amutance12417706
AT1G25490ROSPositiveotherN/Amolecular18650210

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10875
AccessionTaxon
NP_001030769Arabidopsis thaliana
NP_001031035Arabidopsis thaliana
NP_172790Arabidopsis thaliana
NP_173920 ( AT1G25490 )Arabidopsis thaliana
NP_189208Arabidopsis thaliana
131550Chlamydomonas reinhardtii
NP_001062674Oryza sativa Japonica Group
0700010199Ostreococcus tauri
estExt_Genewise1.C_1170081Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_1970071Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2140022Physcomitrella patens subsp. patens
28883.m000734Ricinus communis
30174.m008701Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:1.25.10.100.04581IPR011989Armadillo-like helical
SuperFamilySSF483711.4E-1115583IPR016024Armadillo-type fold
PROSITEPS500770.01048IPR021133HEAT, type 2
PROSITEPS500770.087125IPR021133HEAT, type 2
PROSITEPS500770.0164202IPR021133HEAT, type 2
PfamPF029853.0170192IPR000357HEAT
PROSITEPS500770.0203241IPR021133HEAT, type 2
PfamPF029850.024000000000000004242271IPR000357HEAT
PROSITEPS500770.0242280IPR021133HEAT, type 2
PfamPF029859.7281309IPR000357HEAT
PROSITEPS500770.0281319IPR021133HEAT, type 2
PROSITEPS500770.0320358IPR021133HEAT, type 2
PfamPF029854.1359384IPR000357HEAT
PROSITEPS500770.0359397IPR021133HEAT, type 2
PfamPF029859.0398421IPR000357HEAT
PROSITEPS500770.0398436IPR021133HEAT, type 2
PROSITEPS500770.0437475IPR021133HEAT, type 2
PfamPF029850.24440466IPR000357HEAT
PROSITEPS500770.0476514IPR021133HEAT, type 2
PROSITEPS500770.0515553IPR021133HEAT, type 2