You are querying gene by "AT1G24590".

Locus: AT1G24590 Alias: DRN-LIKE

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - response to auxin stimulus 17376809
BrassinosteroidMutant Hormone signal transduction Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and LEAFY PETIOLE. This gene functions in the regeneration of shoots in tissue culture, probably through transcriptional regulation of CUC1. May also be involved in activation of the cell cycle via CycD1;1. 18830673

Basic gene information ( show / hide contents )

Locus AT1G24590 | Chromosome: 1 | Strand: -
Description response to auxin stimulus
Alias
DRN-LIKE( alias )
DRNL( alias )
ESR2( alias )
SOB2( alias )
Gene model
AT1G24590.1 | From: 8714375 | To: 8715295
Sequence
AT1G24590.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID:
cellular_component
nucleus PMID:
biological_process
response to auxin stimulus PMID: 17376809
embryonic pattern specification PMID: 17376809
cotyledon development PMID: 17376809
regulation of transcription, DNA-dependent PMID:
regulation of cell cycle PMID: 17056621
regulation of transcription PMID: 17056621
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   Brassinosteroid   ]

Genotype PMID Type
drn-1 drnl 18830673 mutant
bim drn-1 drn1 phv 18830673 mutant
drn-1 drn1 phv 18830673 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G24590.1 
length: 921 
miRNA : ath-miR780.1
length: 21 
 
mfe: -27.8 kcal/mol 
p-value: 0.008527 
 
position  81 
target 5' A    C          C    C 
           ACUU CUCGACAGCU CUGG  
           UGGA GAGUUGUCGA GAUC  
miRNA  3'      C          C    U 
 
 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT1G24590AT1G23080PositiveotherN/Amolecular18830673
AT1G24590AT1G51190PositiveotherN/Amolecular18830673
AT1G24590AT1G70940PositiveotherN/Amolecular18830673
AT1G24590AT1G73590PositiveotherN/Amolecular18830673
AT1G24590AT1G77110PositiveotherN/Amolecular18830673
AT1G24590AT2G01420PositiveotherN/Amolecular18830673
AT1G24590AT2G34650PositiveotherN/Amolecular18830673
AT1G24590AT2G47000PositiveotherN/Amolecular18830673
AT1G24590AT3G20840PositiveotherN/Amolecular18830673
AT1G24590AT3G28860PositiveotherN/Amolecular18830673
AT1G24590AT5G13930PositiveotherN/Amolecular18830673
AT1G24590AT5G15100PositiveotherN/Amolecular18830673
AT1G24590AT5G16530PositiveotherN/Amolecular18830673
AT1G24590AT5G57090PositiveotherN/Amolecular18830673

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_90716
AccessionTaxon
NP_173864 ( AT1G24590 )Arabidopsis thaliana
29792.m000600Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.30.730.106.599998525264105E-2256117IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541711.1E-2256117IPR016177DNA-binding, integrase-type
PfamPF008471.0E-1157106IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SMARTSM003806.000016791901594E-3357120IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PROSITEPS510320.057114IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003671.499999775833517E-95869IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003671.499999775833517E-98096IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding