You are querying gene by "AT1G21970".

Locus: AT1G21970 Alias: EMB 212

Hormone Evidence Function category Gene Description PMID
abscisic acidMutant Hormone signal transduction LEAFY COTYLEDON1, transcriptional activator of genes required for both embryo maturation and cellular differentiation.Sequence is similar to HAP3 subunit of the CCAAT-box binding factor.HAP3 subunit is divided into three domains: an amino-terminal A domain, a central B domain, and a carboxyl-terminal C domain. LEC1 shared high similarity with other HAP3 homologs only in central,B domain.LEC1 is required for the specification of cotyledon identity and the completion of embryo maturation.It was sufficient to induce embryogenic programs in vegetative cells, suggesting that LEC1 is a major embryonic regulator that mediates the switch between embryo and vegetative development. 12244265

Basic gene information ( show / hide contents )

Locus AT1G21970 | Chromosome: 1 | Strand: -
Description LEAFY COTYLEDON1, transcriptional activator of genes required for both embryo maturation and cellular differentiation.Sequence is similar to HAP3 subunit of the CCAAT-box binding factor.HAP3 subunit is divided into three domains: an amino-terminal A domain, a central B domain, and a carboxyl-terminal C domain. LEC1 shared high similarity with other HAP3 homologs only in central,B domain.LEC1 is required for the specification of cotyledon identity and the completion of embryo maturation.It was sufficient to induce embryogenic programs in vegetative cells, suggesting that LEC1 is a major embryonic regulator that mediates the switch between embryo and vegetative development.
Alias
EMB 212( alias )
EMB212( alias )
LEC1( alias )
Gene model
AT1G21970.1 | From: 7727566 | To: 7729606
Sequence
AT1G21970.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID: 11118137
cellular_component
nucleus PMID:
intracellular PMID:
biological_process
somatic embryogenesis PMID: 16034595
embryonic development ending in seed dormancy PMID: 9657152
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
lec1-2 12244265 mutant
lec1-1fus3-3 16034595 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT1G21970ABRESPositivetransciptN/AGO/othersN/A
AT1G21970AT1G08780PositivetransciptN/Amutance16731585
AT1G21970AT1G20440PositivetransciptN/AGO/othersN/A
AT1G21970AT2G38050PositivetransciptN/AGO/othersN/A
AT1G21970AT3G23050PositivetransciptN/AGO/othersN/A
AT1G21970AT3G26790PositivetransciptN/Amutance16731585
AT1G21970AT3G63210PositivetransciptN/AGO/othersN/A

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_45112
AccessionTaxon
NP_001078727Arabidopsis thaliana
NP_199578Arabidopsis thaliana
NP_001047986Oryza sativa Japonica Group
29629.m001369Ricinus communis
57991.m000014Ricinus communis
NP_173616 ( AT1G21970 )Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF471132.8e-372137IPR009072Histone-fold
PANTHERPTHR11064:SF91.2e-7045154IPR003957Transcription factor, CBFA/NFYB, DNA topoisomerase
Gene3DG3DSA:1.10.20.101e-3649156IPR009072Histone-fold
PfamPF008082.1e-2663127IPR003958Transcription factor CBF/NF-Y/archaeal histone
PRINTSPR006153e-1691109IPR003957Transcription factor, CBFA/NFYB, DNA topoisomerase
PROSITEPS00685NA94110IPR003956Transcription factor, NFYB/HAP3, conserved site
PRINTSPR006153e-16110128IPR003957Transcription factor, CBFA/NFYB, DNA topoisomerase
PRINTSPR006153e-16129147IPR003957Transcription factor, CBFA/NFYB, DNA topoisomerase