You are querying gene by "AT1G21270".

Locus: AT1G21270 Alias: WAK2

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - response to salicylic acid stimulus 10380805

Basic gene information ( show / hide contents )

Locus AT1G21270 | Chromosome: 1 | Strand: +
Description response to salicylic acid stimulus
Alias
WAK2( alias )
Gene model
AT1G21270.1 | From: 7444919 | To: 7447537
Sequence
AT1G21270.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
protein serine/threonine kinase activity PMID:
cellular_component
plasma membrane PMID: 10380805
biological_process
response to salicylic acid stimulus PMID: 10380805
unidimensional cell growth PMID: 16623892
oligosaccharide metabolic process PMID: 16623892
protein amino acid phosphorylation PMID:
cellular water homeostasis PMID: 16623892
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G21270.1 
length: 2469 
miRNA : ath-miR399b
length: 21 
 
mfe: -29.7 kcal/mol 
p-value: 0.013652 
 
position  254 
target 5' A  A A               A 
           AG G AGCUCUUCUUUGGCA  
           UC C UUGAGAGGAAACCGU  
miRNA  3' G  C G                 
 
 
target: AT1G21270.1 
length: 2469 
miRNA : ath-miR399c
length: 21 
 
mfe: -29.7 kcal/mol 
p-value: 0.011765 
 
position  254 
target 5' A  A A               A 
           AG G AGCUCUUCUUUGGCA  
           UC C UUGAGAGGAAACCGU  
miRNA  3' G  C G                 
 
 
target: AT1G21270.1 
length: 2469 
miRNA : ath-miR413
length: 21 
 
mfe: -22.9 kcal/mol 
p-value: 0.117275 
 
position  2137 
target 5' C                    A 
           GUG AG ACAGGGGAGAUUG  
           CAC UC UGUUCUCUUUGAU  
miRNA  3'     G  U             A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_16346
AccessionTaxon
29648.m001949Ricinus communis
30174.m008708Ricinus communis
NP_173544Arabidopsis thaliana
NP_173546Arabidopsis thaliana
NP_173547Arabidopsis thaliana
NP_173549 ( AT1G21270 )Arabidopsis thaliana
NP_189176Arabidopsis thaliana
NP_564137Arabidopsis thaliana
NP_001043036Oryza sativa Japonica Group
NP_001045654Oryza sativa Japonica Group
NP_001048454Oryza sativa Japonica Group
NP_001048457Oryza sativa Japonica Group
NP_001048474Oryza sativa Japonica Group
NP_001052352Oryza sativa Japonica Group
NP_001052558Oryza sativa Japonica Group
NP_001052561Oryza sativa Japonica Group
NP_001053322Oryza sativa Japonica Group
NP_001056769Oryza sativa Japonica Group
NP_001056930Oryza sativa Japonica Group
NP_001063440Oryza sativa Japonica Group
NP_001052564Oryza sativa Japonica Group
NP_001052568Oryza sativa Japonica Group
NP_001047473Oryza sativa Japonica Group
NP_001063441Oryza sativa Japonica Group
NP_001063443Oryza sativa Japonica Group
NP_001052567Oryza sativa Japonica Group
NP_001053746Oryza sativa Japonica Group
NP_001053747Oryza sativa Japonica Group
NP_001063442Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS500260.0230277IPR000742EGF-like, type 3
SMARTSM001812.099999940305511233277IPR006210EGF-like
PfamPF076457.5E-9278318IPR013091EGF calcium-binding
SMARTSM001792.0999980669153364E-10278319IPR001881EGF-like calcium-binding
PROSITEPS011870.0278304IPR018097EGF-like calcium-binding, conserved site
PROSITEPS500260.0278319IPR000742EGF-like, type 3
PROSITEPS000100.0295306IPR000152EGF-type aspartate/asparagine hydroxylation site
PROSITEPS011860.0304318IPR013032EGF-like region, conserved site
SuperFamilySSF561122.9E-75374682IPR011009Protein kinase-like domain
PfamPF000693.2999999999999737E-44404671IPR017442Serine/threonine-protein kinase-like domain
PROSITEPS500110.0404677IPR000719Protein kinase, catalytic domain
PROSITEPS001080.0525537IPR008271Serine/threonine-protein kinase, active site