You are querying gene by "AT1G20925".

Locus: AT1G20925 Alias: AT1G20925

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - auxin polar transport

Basic gene information ( show / hide contents )

Locus AT1G20925 | Chromosome: 1 | Strand: +
Description auxin polar transport
Alias
AT1G20925( alias )
Gene model
AT1G20925.1 | From: 7290601 | To: 7292496
Sequence
AT1G20925.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
auxin:hydrogen symporter activity PMID:
cellular_component
endomembrane system PMID:
integral to membrane PMID:
biological_process
auxin polar transport PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G20925.1 
length: 1161 
miRNA : ath-miR417
length: 21 
 
mfe: -26.2 kcal/mol 
p-value: 0.003392 
 
position  663 
target 5' A       U             A 
           CGAACAA AUUUGCU CCUUC  
           GCUUGUU UAAGUGA GGAAG  
miRNA  3' A               U       
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_36823
AccessionTaxon
NP_177779Arabidopsis thaliana
NP_565133Arabidopsis thaliana
NP_683316 ( AT1G20925 )Arabidopsis thaliana
NP_849892Arabidopsis thaliana
0700010312Ostreococcus tauri
e_gw1.87.35.1Physcomitrella patens subsp. patens
29682.m000578Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF035474.5e-7012377IPR004776Auxin efflux carrier