You are querying gene by "AT1G20780".

Locus: AT1G20780 Alias: SAUL1

Hormone Evidence Function category Gene Description PMID
abscisic acidMutant Hormone signal transduction Encodes a protein containing a U-box and an ARM domain. 19309463

Basic gene information ( show / hide contents )

Locus AT1G20780 | Chromosome: 1 | Strand: +
Description Encodes a protein containing a U-box and an ARM domain.
Alias
SAUL1( alias )
Gene model
AT1G20780.1 | From: 7217117 | To: 7220773
Sequence
AT1G20780.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
binding PMID:
ubiquitin-protein ligase activity PMID:
cellular_component
ubiquitin ligase complex PMID:
biological_process
protein ubiquitination PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
saul1-1 19309463 mutant
saul1-2 19309463 mutant
saul1 abi1-1 19309463 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G20780.1 
length: 2877 
miRNA : ath-miR775
length: 20 
 
mfe: -34.7 kcal/mol 
p-value: 0.000552 
 
position  1753 
target 5' G              A C     A 
           UGGCACUGCUGGAC A UCGGA  
           ACCGUGACGAUCUG U AGCUU  
miRNA  3'                          
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_30180
AccessionTaxon
NP_001066565Oryza sativa Japonica Group
NP_001077833Arabidopsis thaliana
NP_177765Arabidopsis thaliana
NP_564125 ( AT1G20780 )Arabidopsis thaliana
NP_001050813Oryza sativa Japonica Group
e_gw1.124.14.1Physcomitrella patens subsp. patens
e_gw1.3.441.1Physcomitrella patens subsp. patens
e_gw1.3.442.1Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_900161Physcomitrella patens subsp. patens
30170.m014229Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF045643.8e-152499IPR003613U box domain
SMARTSM005041e-262694IPR003613U box domain
SuperFamilySSF483711e-4468440IPR016024Armadillo-type fold
Gene3DG3DSA:1.25.10.103.3e-35110436IPR011989Armadillo-like helical
SMARTSM0018568133173IPR000225Armadillo
SMARTSM0018517175215IPR000225Armadillo
SMARTSM001853e+02301340IPR000225Armadillo
SMARTSM001852e+02341386IPR000225Armadillo
SuperFamilySSF483711.4e-22371746IPR016024Armadillo-type fold
SMARTSM0018558433475IPR000225Armadillo
SMARTSM001851e+02577619IPR000225Armadillo
Gene3DG3DSA:1.25.10.102.6e-09582787IPR011989Armadillo-like helical
SMARTSM001850.3660701IPR000225Armadillo
PfamPF005144.9e-06668699IPR000225Armadillo
PROSITEPS501769.957672699IPR000225Armadillo
SMARTSM001851.2e+02705747IPR000225Armadillo