You are querying gene by "AT1G19850".

Locus: AT1G19850 Alias: ARF5

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone signal transduction transcription factor 9482737
GeneOntology - response to auxin stimulus 11283339

Basic gene information ( show / hide contents )

Locus AT1G19850 | Chromosome: 1 | Strand: +
Description transcription factor
ARF5( alias )
IAA24( alias )
MP( alias )
Gene model
AT1G19850.1 | From: 6886870 | To: 6891365
AT1G19850.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
transcription factor activity PMID: 9482737
nucleus PMID: 9482737
xylem and phloem pattern formation PMID: 8904808
meristem development PMID: 17553903
response to auxin stimulus PMID: 11283339
leaf vascular tissue pattern formation PMID: 17553903
root development PMID: 17553903
flower development PMID: 17553903
embryonic development PMID: 17553903
longitudinal axis specification PMID: 8904808
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
arf5/mp 9482737 mutant

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT1G19850.1 
length: 3375 
miRNA : ath-miR858
length: 21 
mfe: -26.2 kcal/mol 
p-value: 0.039961 
position  3102 
target 5' U      C         G     A 
miRNA  3'        C                 
Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_19971
NP_001031115Arabidopsis thaliana
NP_001078672Arabidopsis thaliana
NP_174323Arabidopsis thaliana
NP_198518Arabidopsis thaliana
NP_001045993Oryza sativa Japonica Group
NP_001054222Oryza sativa Japonica Group
NP_001058360Oryza sativa Japonica Group
NP_001067266Oryza sativa Japonica Group
e_gw1.119.103.1Physcomitrella patens subsp. patens
e_gw1.133.91.1Physcomitrella patens subsp. patens
e_gw1.65.212.1Physcomitrella patens subsp. patens
e_gw1.86.122.1Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_1630077Physcomitrella patens subsp. patens
gw1.6.284.1Physcomitrella patens subsp. patens
29599.m000177Ricinus communis
29769.m000463Ricinus communis
30170.m014161Ricinus communis
NP_173414 ( AT1G19850 )Arabidopsis thaliana
NP_001054169Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF023623.000000000000004E-20158259IPR003340Transcriptional factor B3
PROSITEPS508630.0158260IPR003340Transcriptional factor B3
PfamPF065079.699999999999892E-33284367IPR010525Auxin response factor
PfamPF023091.6000000000000009E-22766882IPR003311AUX/IAA protein