You are querying gene by "AT1G18970".

Locus: AT1G18970 Alias: GLP4

Expression of this gene is regulated by hormone (see microarray data for this gene), but no genetic evidence or Gene Ontology evidence yet supported that this is a hormone-related gene.

Basic gene information ( show / hide contents )

Locus AT1G18970 | Chromosome: 1 | Strand: -
Description Encodes a germin-like protein with possible oxalate oxidase activity (based on GenBank record).
Alias
GLP4( alias )
Gene model
AT1G18970.1 | From: 6554559 | To: 6555331
Sequence
AT1G18970.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
metal ion binding PMID:
nutrient reservoir activity PMID:
manganese ion binding PMID:
cellular_component
endomembrane system PMID:
apoplast PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G18970.1 
length: 810 
miRNA : ath-miR395b
length: 21 
 
mfe: -28.2 kcal/mol 
p-value: 0.012128 
 
position  214 
target 5' U               G   A 
           GG CCCCUUAGACAC UCA  
           UC GGGGGGUUUGUG AGU  
miRNA  3' C  A            A   C 
 
 
target: AT1G18970.1 
length: 810 
miRNA : ath-miR395c
length: 21 
 
mfe: -28.2 kcal/mol 
p-value: 0.009335 
 
position  214 
target 5' U               G   A 
           GG CCCCUUAGACAC UCA  
           UC GGGGGGUUUGUG AGU  
miRNA  3' C  A            A   C 
 
 
target: AT1G18970.1 
length: 810 
miRNA : ath-miR395f
length: 21 
 
mfe: -28.2 kcal/mol 
p-value: 0.007134 
 
position  214 
target 5' U               G   A 
           GG CCCCUUAGACAC UCA  
           UC GGGGGGUUUGUG AGU  
miRNA  3' C  A            A   C 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_69670
AccessionTaxon
NP_173332Arabidopsis thaliana
NP_564067 ( AT1G18970 )Arabidopsis thaliana
30147.m014037Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:2.60.120.106.000016791901456E-7028218IPR014710RmlC-like jelly roll fold
SuperFamilySSF511828.1E-4928218IPR011051Cupin, RmlC-type
SMARTSM008355.499993387561817E-2864212IPR006045Cupin 1
PfamPF001903.7E-2169211IPR006045Cupin 1
PROSITEPS007250.0107120IPR019780Germin, manganese binding site
PRINTSPR003255.799996538547805E-25112132IPR001929Germin
PRINTSPR003255.799996538547805E-25142162IPR001929Germin
PRINTSPR003255.799996538547805E-25175190IPR001929Germin