You are querying gene by "AT1G18400".

Locus: AT1G18400 Alias: BEE1

Hormone Evidence Function category Gene Description PMID
brassinosteroidTransgenic Hormone signal transduction brassinosteroid early response genes 12454087
Mutant Hormone signal transduction brassinosteroid early response genes 12454087

Basic gene information ( show / hide contents )

Locus AT1G18400 | Chromosome: 1 | Strand: +
Description brassinosteroid early response genes
Alias
BEE1( alias )
Gene model
AT1G18400.1 | From: 6331391 | To: 6333736
Sequence
AT1G18400.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID: 11118137
cellular_component
nucleus PMID:
biological_process
regulation of transcription PMID: 11118137
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   brassinosteroid   ]

Genotype PMID Type
BEE1 ox 12454087 transgenic
bee1 12454087 mutant
bee1bee2bee3 12454087 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G18400.1 
length: 1016 
miRNA : ath-miR837-5p
length: 21 
 
mfe: -22.5 kcal/mol 
p-value: 0.040643 
 
position  794 
target 5' G     A          G  A 
           GAGAC AACAAGAGAU GG  
           CUUUG UUGUUCUUUG CU  
miRNA  3' A     C          A  A 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_69668
AccessionTaxon
NP_173276 ( AT1G18400 )Arabidopsis thaliana
NP_177524Arabidopsis thaliana
29974.m000242Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS508880.0145202IPR001092Helix-loop-helix DNA-binding domain
Gene3DG3DSA:4.10.280.101.6999992228405136E-7147228IPR011598Helix-loop-helix DNA-binding
SuperFamilySSF474599.2E-15147222IPR011598Helix-loop-helix DNA-binding
PfamPF000100.003000000000000001155202IPR001092Helix-loop-helix DNA-binding domain
SMARTSM003537.600000111158117E-9157207IPR001092Helix-loop-helix DNA-binding domain