You are querying gene by "AT1G18330".

Locus: AT1G18330 Alias: EPR1

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - response to ethylene stimulus 16463103

Basic gene information ( show / hide contents )

Locus AT1G18330 | Chromosome: 1 | Strand: -
Description response to ethylene stimulus
Alias
EPR1( alias )
Gene model
AT1G18330.1 | From: 6305959 | To: 6308003
Sequence
AT1G18330.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 11118137
biological_process
response to cadmium ion PMID: 16463103
response to salt stress PMID: 16463103
response to ethylene stimulus PMID: 16463103
regulation of transcription PMID: 11118137
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G18330.1 
length: 1529 
miRNA : ath-miR844
length: 21 
 
mfe: -22.4 kcal/mol 
p-value: 0.014900 
 
position  1409 
target 5' G    G               U 
           AGUU GUAAGUGGUUUUACU  
           UCGA UAUUCGUUAGAAUGG  
miRNA  3'      A               U 
 
 
target: AT1G18330.2 
length: 1636 
miRNA : ath-miR844
length: 21 
 
mfe: -22.4 kcal/mol 
p-value: 0.015848 
 
position  1521 
target 5' G    G               U 
           AGUU GUAAGUGGUUUUACU  
           UCGA UAUUCGUUAGAAUGG  
miRNA  3'      A               U 
 
 
target: AT1G18330.2 
length: 1636 
miRNA : ath-miR854a
length: 21 
 
mfe: -28.5 kcal/mol 
p-value: 0.019311 
 
position  209 
target 5' U                    U 
           UUCUUUUCCCUGUUUUC UC  
           AGGAGGAGGGAUAGGAG AG  
miRNA  3' G                 U    
 
 
target: AT1G18330.2 
length: 1636 
miRNA : ath-miR854b
length: 21 
 
mfe: -28.5 kcal/mol 
p-value: 0.017681 
 
position  209 
target 5' U                    U 
           UUCUUUUCCCUGUUUUC UC  
           AGGAGGAGGGAUAGGAG AG  
miRNA  3' G                 U    
 
 
target: AT1G18330.2 
length: 1636 
miRNA : ath-miR854c
length: 21 
 
mfe: -28.5 kcal/mol 
p-value: 0.019201 
 
position  209 
target 5' U                    U 
           UUCUUUUCCCUGUUUUC UC  
           AGGAGGAGGGAUAGGAG AG  
miRNA  3' G                 U    
 
 
target: AT1G18330.2 
length: 1636 
miRNA : ath-miR854d
length: 21 
 
mfe: -28.5 kcal/mol 
p-value: 0.017980 
 
position  209 
target 5' U                    U 
           UUCUUUUCCCUGUUUUC UC  
           AGGAGGAGGGAUAGGAG AG  
miRNA  3' G                 U    
 
 
target: AT1G18330.2 
length: 1636 
miRNA : ath-miR854e
length: 21 
 
mfe: -28.5 kcal/mol 
p-value: 0.019891 
 
position  209 
target 5' U                    U 
           UUCUUUUCCCUGUUUUC UC  
           AGGAGGAGGGAUAGGAG AG  
miRNA  3' G                 U    
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_37240
AccessionTaxon
NP_001117304Arabidopsis thaliana
NP_173269 ( AT1G18330 )Arabidopsis thaliana
NP_683543Arabidopsis thaliana
29677.m000183Ricinus communis
NP_198542Arabidopsis thaliana
NP_001058645Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF466893.6E-1544102IPR009057Homeodomain-like
PROSITEPS512940.04599IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
TIGRFAMTIGR015571.700002955900538E-174898IPR006447Myb-like DNA-binding domain, SHAQKYF class
SMARTSM007173.000000679928713E-134997IPR001005SANT, DNA-binding
PfamPF002495.699999999999995E-125094IPR014778Myb, DNA-binding
SuperFamilySSF466893.599996434360067E-1570128IPR009057Homeodomain-like
PROSITEPS512940.071125IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
TIGRFAMTIGR015571.700002955900538E-1774124IPR006447Myb-like DNA-binding domain, SHAQKYF class
SMARTSM007173.000000679928713E-1375123IPR001005SANT, DNA-binding
PfamPF002496.300000000000004E-1276120IPR014778Myb, DNA-binding