You are querying gene by "AT1G17420".

Locus: AT1G17420 Alias: LOX3

Hormone Evidence Function category Gene Description PMID
jasmonic acidGeneOntology - jasmonic acid biosynthetic process 8702864

Basic gene information ( show / hide contents )

Locus AT1G17420 | Chromosome: 1 | Strand: +
Description jasmonic acid biosynthetic process
LOX3( alias )
Gene model
AT1G17420.1 | From: 5977404 | To: 5981473
AT1G17420.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen PMID:
metal ion binding PMID:
iron ion binding PMID:
lipoxygenase activity PMID:
chloroplast PMID:
response to wounding PMID: 9232884
defense response PMID: 9232884
jasmonic acid biosynthetic process PMID: 8702864
growth PMID: 9232884
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT1G17420.1 
length: 2957 
miRNA : ath-miR858
length: 21 
mfe: -25.2 kcal/mol 
p-value: 0.053867 
position  2705 
target 5' A   A            A    G 
miRNA  3'     C            G      
target: AT1G17420.1 
length: 2957 
miRNA : ath-miR869.2
length: 21 
mfe: -25.1 kcal/mol 
p-value: 0.065579 
position  1439 
target 5' G      A        C   A  U 
miRNA  3'        A        U        

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11048
29468.m000030Ricinus communis
29726.m003891Ricinus communis
29808.m000898Ricinus communis
29851.m002422Ricinus communis
29851.m002424Ricinus communis
29929.m004699Ricinus communis
30128.m008781Ricinus communis
NP_176923Arabidopsis thaliana
NP_177396Arabidopsis thaliana
NP_188879Arabidopsis thaliana
NP_564021 ( AT1G17420 )Arabidopsis thaliana
NP_566875Arabidopsis thaliana
144677Chlamydomonas reinhardtii
NP_001049158Oryza sativa Japonica Group
NP_001050993Oryza sativa Japonica Group
NP_001050995Oryza sativa Japonica Group
NP_001052913Oryza sativa Japonica Group
NP_001055143Oryza sativa Japonica Group
NP_001062199Oryza sativa Japonica Group
NP_001062200Oryza sativa Japonica Group
NP_001068135Oryza sativa Japonica Group
e_gw1.171.1.1Physcomitrella patens subsp. patens
e_gw1.21.1.1Physcomitrella patens subsp. patens
e_gw1.434.22.1Physcomitrella patens subsp. patens
e_gw1.97.30.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_4190013Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_4190004Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2320058Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_4190009Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_4190017Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_700115Physcomitrella patens subsp. patens
29680.m001710Ricinus communis
30152.m002449Ricinus communis
30169.m006387Ricinus communis
30169.m006389Ricinus communis
30178.m000859Ricinus communis
NP_175900Arabidopsis thaliana
NP_001046180Oryza sativa Japonica Group
NP_001050990Oryza sativa Japonica Group
NP_001051212Oryza sativa Japonica Group
NP_001067011Oryza sativa Japonica Group
NP_001067015Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:, LH2
SuperFamilySSF497234.8E-4983226IPR008976Lipase/lipooxygenase, PLAT/LH2
SMARTSM003081.400005069073092E-4984223IPR001024Lipoxygenase, LH2
PROSITEPS500950.086222IPR001024Lipoxygenase, LH2
PfamPF014775.2999999999999875E-14120220IPR001024Lipoxygenase, LH2
PRINTSPR004686.299981794347407E-66192210IPR001246Lipoxygenase, plant
PRINTSPR004686.299981794347407E-66218239IPR001246Lipoxygenase, plant
PROSITEPS513930.0225919IPR013819Lipoxygenase, C-terminal
SuperFamilySSF484840.0227919IPR013819Lipoxygenase, C-terminal
PfamPF003050.0234903IPR013819Lipoxygenase, C-terminal
PRINTSPR004686.299981794347407E-66257273IPR001246Lipoxygenase, plant
PRINTSPR004686.299981794347407E-66289308IPR001246Lipoxygenase, plant
PRINTSPR004686.299981794347407E-66355376IPR001246Lipoxygenase, plant
PRINTSPR004686.299981794347407E-66404420IPR001246Lipoxygenase, plant
PRINTSPR004686.299981794347407E-66443462IPR001246Lipoxygenase, plant
PRINTSPR004686.299981794347407E-66510534IPR001246Lipoxygenase, plant
PRINTSPR000876.900014785635071E-20555572IPR013819Lipoxygenase, C-terminal
PRINTSPR000876.900014785635071E-20573590IPR013819Lipoxygenase, C-terminal
PROSITEPS007110.0573587IPR020833Lipoxygenase, iron binding site
PRINTSPR000876.900014785635071E-20593613IPR013819Lipoxygenase, C-terminal
PROSITEPS000810.0600610IPR020834Lipoxygenase, conserved site
PRINTSPR004686.299981794347407E-66831845IPR001246Lipoxygenase, plant