You are querying gene by "AT1G16060".

Locus: AT1G16060 Alias: ADAP

Hormone Evidence Function category Gene Description PMID
abscisic acidTransgenic Hormone signal transduction Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth. 19390821
Mutant Hormone signal transduction Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth. 19390821

Basic gene information ( show / hide contents )

Locus AT1G16060 | Chromosome: 1 | Strand: +
Description Encodes ADAP, an AP2-domain protein that interacts with ARIA. ADAP is a positive regulator of the ABA response and is also involved in regulating seedling growth.
Alias
ADAP( alias )
Gene model
AT1G16060.2 | From: 5508537 | To: 5511729
AT1G16060.1 | From: 5508501 | To: 5511729
Sequence
AT1G16060.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G16060.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID: 9192694
transcription factor activity PMID: 10948255
cellular_component
nucleus PMID: 10948255
biological_process
organ morphogenesis PMID: 8742707
regulation of transcription, DNA-dependent PMID: 8742706
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
adap 19390821 mutant
35S:ADAP 19390821 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G16060.1 
length: 1220 
miRNA : ath-miR854a
length: 21 
 
mfe: -28.8 kcal/mol 
p-value: 0.012477 
 
position  44 
target 5' U        U     G      G 
           UCCUCUUC UUUAU UUCAUC  
           AGGAGGAG GGAUA GAGUAG  
miRNA  3' G              G        
 
 
target: AT1G16060.1 
length: 1220 
miRNA : ath-miR854b
length: 21 
 
mfe: -28.8 kcal/mol 
p-value: 0.010525 
 
position  44 
target 5' U        U     G      G 
           UCCUCUUC UUUAU UUCAUC  
           AGGAGGAG GGAUA GAGUAG  
miRNA  3' G              G        
 
 
target: AT1G16060.1 
length: 1220 
miRNA : ath-miR854c
length: 21 
 
mfe: -28.8 kcal/mol 
p-value: 0.011978 
 
position  44 
target 5' U        U     G      G 
           UCCUCUUC UUUAU UUCAUC  
           AGGAGGAG GGAUA GAGUAG  
miRNA  3' G              G        
 
 
target: AT1G16060.1 
length: 1220 
miRNA : ath-miR854d
length: 21 
 
mfe: -28.8 kcal/mol 
p-value: 0.010792 
 
position  44 
target 5' U        U     G      G 
           UCCUCUUC UUUAU UUCAUC  
           AGGAGGAG GGAUA GAGUAG  
miRNA  3' G              G        
 
 
target: AT1G16060.1 
length: 1220 
miRNA : ath-miR854e
length: 21 
 
mfe: -28.8 kcal/mol 
p-value: 0.012468 
 
position  44 
target 5' U        U     G      G 
           UCCUCUUC UUUAU UUCAUC  
           AGGAGGAG GGAUA GAGUAG  
miRNA  3' G              G        
 
 
target: AT1G16060.2 
length: 1414 
miRNA : ath-miR854a
length: 21 
 
mfe: -28.8 kcal/mol 
p-value: 0.014700 
 
position  8 
target 5' U        U     G      G 
           UCCUCUUC UUUAU UUCAUC  
           AGGAGGAG GGAUA GAGUAG  
miRNA  3' G              G        
 
 
target: AT1G16060.2 
length: 1414 
miRNA : ath-miR854b
length: 21 
 
mfe: -28.8 kcal/mol 
p-value: 0.012787 
 
position  8 
target 5' U        U     G      G 
           UCCUCUUC UUUAU UUCAUC  
           AGGAGGAG GGAUA GAGUAG  
miRNA  3' G              G        
 
 
target: AT1G16060.2 
length: 1414 
miRNA : ath-miR854c
length: 21 
 
mfe: -28.8 kcal/mol 
p-value: 0.014299 
 
position  8 
target 5' U        U     G      G 
           UCCUCUUC UUUAU UUCAUC  
           AGGAGGAG GGAUA GAGUAG  
miRNA  3' G              G        
 
 
target: AT1G16060.2 
length: 1414 
miRNA : ath-miR854d
length: 21 
 
mfe: -28.8 kcal/mol 
p-value: 0.013071 
 
position  8 
target 5' U        U     G      G 
           UCCUCUUC UUUAU UUCAUC  
           AGGAGGAG GGAUA GAGUAG  
miRNA  3' G              G        
 
 
target: AT1G16060.2 
length: 1414 
miRNA : ath-miR854e
length: 21 
 
mfe: -28.8 kcal/mol 
p-value: 0.014857 
 
position  8 
target 5' U        U     G      G 
           UCCUCUUC UUUAU UUCAUC  
           AGGAGGAG GGAUA GAGUAG  
miRNA  3' G              G        
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_37212
AccessionTaxon
NP_001077849Arabidopsis thaliana
NP_178088Arabidopsis thaliana
NP_563990 ( AT1G16060 )Arabidopsis thaliana
NP_001061917Oryza sativa Japonica Group
NP_001063215Oryza sativa Japonica Group
30114.m000507Ricinus communis
30131.m006896Ricinus communis
NP_973839Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS510320.0154IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SMARTSM003801.7000001561047378E-41360IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541711.8E-91857IPR016177DNA-binding, integrase-type
Gene3DG3DSA:3.30.730.103.600000387007365E-52257IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
Gene3DG3DSA:3.30.730.103.6e-1157127IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PfamPF008473.6e-1357116IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541712e-1857127IPR016177DNA-binding, integrase-type
SMARTSM003804.2e-2458130IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PROSITEPS5103220.06058124IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003673.1e-055970IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
Gene3DG3DSA:3.30.730.102.70000183580768E-1489151IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PfamPF008471.7000000000000003E-1189140IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541717.9E-2089151IPR016177DNA-binding, integrase-type
SMARTSM003808.300014037915887E-2690154IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PROSITEPS510320.090148IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
Gene3DG3DSA:3.30.730.102.5e-14159221IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PfamPF008473e-14159210IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541717.9e-20159221IPR016177DNA-binding, integrase-type
SMARTSM003801.4e-25160224IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PROSITEPS5103217.859160218IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003673.1e-05200220IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding