You are querying gene by "AT1G15050".

Locus: AT1G15050 Alias: IAA34

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - response to auxin stimulus 12036262

Basic gene information ( show / hide contents )

Locus AT1G15050 | Chromosome: 1 | Strand: -
Description response to auxin stimulus
Alias
IAA34( alias )
Gene model
AT1G15050.1 | From: 5182251 | To: 5183238
Sequence
AT1G15050.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID: 11118137
cellular_component
nucleus PMID:
biological_process
response to auxin stimulus PMID: 12036262
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G15050.1 
length: 558 
miRNA : ath-miR396a
length: 21 
 
mfe: -29.4 kcal/mol 
p-value: 0.000704 
 
position  493 
target 5' G      U              C 
           AGUUCA AGAAAGC GUGGAG  
           UCAAGU UCUUUCG CACCUU  
miRNA  3' G              A        
 
 
target: AT1G15050.1 
length: 558 
miRNA : ath-miR396b
length: 21 
 
mfe: -29.8 kcal/mol 
p-value: 0.000289 
 
position  492 
target 5' U       U              C 
           GAGUUCA AGAAAGC GUGGAG  
           UUCAAGU UCUUUCG CACCUU  
miRNA  3'                 A        
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_58402
AccessionTaxon
NP_172959 ( AT1G15050 )Arabidopsis thaliana
NP_973390Arabidopsis thaliana
29660.m000755Ricinus communis
NP_178229Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF023096.2e-3187182IPR003311AUX/IAA protein
PROSITEPS5096231.41593179IPR011525Aux/IAA-ARF-dimerisation