You are querying gene by "AT1G14790".

Locus: AT1G14790 Alias: ATRDRP1

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - response to salicylic acid stimulus 15024409

Basic gene information ( show / hide contents )

Locus AT1G14790 | Chromosome: 1 | Strand: -
Description response to salicylic acid stimulus
Alias
ATRDRP1( alias )
RDR1( alias )
Gene model
AT1G14790.1 | From: 5093956 | To: 5098027
Sequence
AT1G14790.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
RNA-directed RNA polymerase activity PMID:
nucleic acid binding PMID:
biological_process
posttranscriptional gene silencing PMID:
response to salicylic acid stimulus PMID: 15024409
response to virus PMID: 12650452
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G14790.1 
length: 3807 
miRNA : ath-miR866-5p
length: 21 
 
mfe: -22.3 kcal/mol 
p-value: 0.104107 
 
position  1358 
target 5' C    A            A   A 
           UUGA AAGGUUCGUUCC UGG  
           AAUU UUUUAGGCAAGG ACU  
miRNA  3'      G            A     
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10266
AccessionTaxon
NP_568170Arabidopsis thaliana
NP_001058952Oryza sativa Japonica Group
estExt_Genewise1.C_440193Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_180056Physcomitrella patens subsp. patens
29333.m001099Ricinus communis
e_gw1.08.00.117.1Ostreococcus tauri
96705Chlamydomonas reinhardtii
NP_172932 ( AT1G14790 )Arabidopsis thaliana
NP_192851Arabidopsis thaliana
NP_001048051Oryza sativa Japonica Group
estExt_Genewise1.C_1780062Physcomitrella patens subsp. patens
29848.m004633Ricinus communis
30147.m013981Ricinus communis
NP_190519Arabidopsis thaliana
NP_001043229Oryza sativa Japonica Group
gw1.495.1.1Physcomitrella patens subsp. patens
36017.m000034Ricinus communis
33361.m000014Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR230790.0791106IPR007855RNA-dependent RNA polymerase, eukaryotic-type
PfamPF051830.0520893IPR007855RNA-dependent RNA polymerase, eukaryotic-type