You are querying gene by "AT1G12980".

Locus: AT1G12980 Alias: DRN

Hormone Evidence Function category Gene Description PMID
cytokininTransgenic Hormone signal transduction Encodes an AP2/ERF protein, is expressed in a subdomain of meristem stem cells, in lateral organ anlagen, and transiently in the distal domain of organ primordia. It is a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ESR1). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. Can confer cytokinin-independent shoot formation and causes severe meristem defects when overexpressed in Arabidopsis root explants.ESR1 expression was induced by cytokinin. 11752375
GeneOntology - response to cytokinin stimulus 11752375
BrassinosteroidMutant Hormone signal transduction Encodes an AP2/ERF protein, is expressed in a subdomain of meristem stem cells, in lateral organ anlagen, and transiently in the distal domain of organ primordia. It is a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ESR1). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. Can confer cytokinin-independent shoot formation and causes severe meristem defects when overexpressed in Arabidopsis root explants.ESR1 expression was induced by cytokinin. 18830673

Basic gene information ( show / hide contents )

Locus AT1G12980 | Chromosome: 1 | Strand: +
Description Encodes an AP2/ERF protein, is expressed in a subdomain of meristem stem cells, in lateral organ anlagen, and transiently in the distal domain of organ primordia. It is a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ESR1). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. Can confer cytokinin-independent shoot formation and causes severe meristem defects when overexpressed in Arabidopsis root explants.ESR1 expression was induced by cytokinin.
Alias
DRN( alias )
ESR1( alias )
Gene model
AT1G12980.1 | From: 4429716 | To: 4430963
Sequence
AT1G12980.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
protein binding PMID:
transcription factor activity PMID:
cellular_component
nucleus PMID:
biological_process
organ morphogenesis PMID: 11752375
embryonic pattern specification PMID: 17376809
cotyledon development PMID: 17376809
regulation of transcription, DNA-dependent PMID:
response to cytokinin stimulus PMID: 11752375
specification of organ axis polarity PMID: 12615942
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

  cytokinin     Brassinosteroid  

[   cytokinin   ]

Genotype PMID Type
ESR1-ox 11752375 transgenic

[   Brassinosteroid   ]

Genotype PMID Type
drn-1 drnl 18830673 mutant
bim drn-1 drn1 phv 18830673 mutant
drn-1 drn1 phv 18830673 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

No miRNA interaction information for this gene.

Gene1Gene2Positive/NegativeCategoryEnzyme activityEvidencePMID
AT1G12980AT1G23080PositiveotherN/Amolecular18830673
AT1G12980AT1G51190PositiveotherN/Amolecular18830673
AT1G12980AT1G70940PositiveotherN/Amolecular18830673
AT1G12980AT1G73590PositiveotherN/Amolecular18830673
AT1G12980AT1G77110PositiveotherN/Amolecular18830673
AT1G12980AT2G01420PositiveotherN/Amolecular18830673
AT1G12980AT2G34650PositiveotherN/Amolecular18830673
AT1G12980AT2G47000PositiveotherN/Amolecular18830673
AT1G12980AT3G20840PositiveotherN/Amolecular18830673
AT1G12980AT3G28860PositiveotherN/Amolecular18830673
AT1G12980AT5G13930PositiveotherN/Amolecular18830673
AT1G12980AT5G15100PositiveotherN/Amolecular18830673
AT1G12980AT5G16530PositiveotherN/Amolecular18830673
AT1G12980AT5G57090PositiveotherN/Amolecular18830673

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_27648
AccessionTaxon
NP_172758 ( AT1G12980 )Arabidopsis thaliana
e_gw1.19.142.1Physcomitrella patens subsp. patens
e_gw1.20.254.1Physcomitrella patens subsp. patens
e_gw1.5.258.1Physcomitrella patens subsp. patens
e_gw1.74.130.1Physcomitrella patens subsp. patens
gw1.130.147.1Physcomitrella patens subsp. patens
e_gw1.138.99.1Physcomitrella patens subsp. patens
e_gw1.345.20.1Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_6000034Physcomitrella patens subsp. patens
gw1.121.77.1Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_84000050Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.30.730.101.500003069710871E-2155116IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PfamPF008471.2000000000000005E-1155105IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541711.2E-2255116IPR016177DNA-binding, integrase-type
SMARTSM003805.799996538547806E-3256119IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PROSITEPS510320.056113IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003673.000000679928713E-95768IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003673.000000679928713E-97995IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding