You are querying gene by "AT1G12820".

Locus: AT1G12820 Alias: AFB3

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone receptor TIR1 homolog F-box protein 15992545
GeneOntology - auxin binding 15917797

Basic gene information ( show / hide contents )

Locus AT1G12820 | Chromosome: 1 | Strand: -
Description TIR1 homolog F-box protein
AFB3( alias )
Gene model
AT1G12820.1 | From: 4368758 | To: 4371291
AT1G12820.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
auxin binding PMID: 15917797
ubiquitin-protein ligase activity PMID:
cellular_component_unknown PMID:
response to molecule of bacterial origin PMID: 16627744
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
afb3 15992545 mutant
wxr1 tir1-1 afb3-1 20562234 mutant
wxr1 tir1-1 afb2-1 afb3-1 20562234 mutant

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT1G12820.1 
length: 2229 
miRNA : ath-miR2937
length: 21 
mfe: -26.2 kcal/mol 
p-value: 0.026409 
position  1743 
target 5' A   G                C 
miRNA  3'     A                A 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_24415
NP_563915 ( AT1G12820 )Arabidopsis thaliana
NP_566800Arabidopsis thaliana
NP_567135Arabidopsis thaliana
NP_567255Arabidopsis thaliana
NP_001052659Oryza sativa Japonica Group
NP_001054666Oryza sativa Japonica Group
estExt_fgenesh1_pm.C_160001Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_440022Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1370051Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1960072Physcomitrella patens subsp. patens
29647.m002022Ricinus communis
29933.m001427Ricinus communis
30131.m006863Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SMARTSM002565.800002906704665E-5445IPR001810F-box domain, cyclin-like