You are querying gene by "AT1G12610".

Locus: AT1G12610 Alias: DDF1

Hormone Evidence Function category Gene Description PMID
gibberellinGeneOntology - gibberellin biosynthetic process 14871311

Basic gene information ( show / hide contents )

Locus AT1G12610 | Chromosome: 1 | Strand: -
Description gibberellin biosynthetic process
DDF1( alias )
Gene model
AT1G12610.1 | From: 4289942 | To: 4291015
AT1G12610.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
DNA binding PMID:
transcription factor activity PMID: 11118137
nucleus PMID:
regulation of timing of transition from vegetative to reproductive phase PMID: 14871311
response to salt stress PMID: 14871311
cell growth PMID: 14871311
gibberellin biosynthetic process PMID: 14871311
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

Hormone treatment related datasets  
Abiotic stress treatment related datasets (in root)  
Abiotic stress treatment related datasets (in shoot)  
Development related datasets  

miRNA interaction information for this gene

(Note:target use cDNA sequence)
target: AT1G12610.1 
length: 1074 
miRNA : ath-miR396a
length: 21 
mfe: -25.2 kcal/mol 
p-value: 0.015167 
position  497 
target 5' G    G   C        C    A 
miRNA  3' G                 A      
target: AT1G12610.1 
length: 1074 
miRNA : ath-miR396b
length: 21 
mfe: -25.7 kcal/mol 
p-value: 0.009063 
position  496 
target 5' A     G   C        C    A 
miRNA  3'                    A      

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_24356
NP_001077764Arabidopsis thaliana
NP_172721 ( AT1G12610 )Arabidopsis thaliana
NP_176491Arabidopsis thaliana
30147.m014313Ricinus communis
30190.m011119Ricinus communis
30190.m011120Ricinus communis
NP_200012Arabidopsis thaliana
NP_567719Arabidopsis thaliana
NP_567720Arabidopsis thaliana
NP_567721Arabidopsis thaliana
NP_001047727Oryza sativa Japonica Group
NP_001053608Oryza sativa Japonica Group
NP_001056661Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.30.730.105.299996575502399E-202889IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PfamPF008473.100000000000002E-92878IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541715.3E-212889IPR016177DNA-binding, integrase-type
SMARTSM003803.8999986179521835E-232992IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PROSITEPS510320.02986IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003673.300001644806241E-73041IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003673.300001644806241E-75268IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding