You are querying gene by "AT1G12420".

Locus: AT1G12420 Alias: ACR8

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 12481063

Basic gene information ( show / hide contents )

Locus AT1G12420 | Chromosome: 1 | Strand: -
Description response to abscisic acid stimulus
Alias
ACR8( alias )
Gene model
AT1G12420.1 | From: 4226360 | To: 4229136
Sequence
AT1G12420.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
amino acid binding PMID: 12481063
cellular_component
cellular_component_unknown PMID:
biological_process
response to abscisic acid stimulus PMID: 12481063
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G12420.1 
length: 1858 
miRNA : ath-miR1888
length: 21 
 
mfe: -20.5 kcal/mol 
p-value: 0.053374 
 
position  1548 
target 5' A                G   A 
           UCUUU CAAAUCUUGG UUG  
           AGAAG GUUUAGAAUU AAU  
miRNA  3' A     U          G     
 
 
target: AT1G12420.1 
length: 1858 
miRNA : ath-miR826
length: 21 
 
mfe: -27.0 kcal/mol 
p-value: 0.019758 
 
position  929 
target 5' G                    A 
           ACG GUUCAGAAUUGGGCUG  
           UGC UAGGUUUUGGCCUGAU  
miRNA  3' G   A                  
 
 
target: AT1G12420.1 
length: 1858 
miRNA : ath-miR845b
length: 22 
 
mfe: -24.5 kcal/mol 
p-value: 0.011200 
 
position  203 
target 5' G                   A   C 
           UAUUAGUUU GUAUCAGAG UGG  
           GUAGUUAAA CAUAGUCUC GCU  
miRNA  3'           C               
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_69642
AccessionTaxon
NP_172704 ( AT1G12420 )Arabidopsis thaliana
NP_001060867Oryza sativa Japonica Group
30190.m011048Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF018422.0999999999999987E-44283IPR002912Amino acid-binding ACT
PfamPF018420.003000000000000001115159IPR002912Amino acid-binding ACT
PfamPF018420.13248305IPR002912Amino acid-binding ACT
PfamPF018429.900000000000003E-7326386IPR002912Amino acid-binding ACT