You are querying gene by "AT1G09950".

Locus: AT1G09950 Alias: RAS1

Hormone Evidence Function category Gene Description PMID
abscisic acidTransgenic Hormone signal transduction transcription factor-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, flower, root, leaf; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: ZW2 (TAIR:AT1G58330.1); Has 330 Blast hits to 329 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 330; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 20212128
Mutant Hormone signal transduction transcription factor-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, flower, root, leaf; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: ZW2 (TAIR:AT1G58330.1); Has 330 Blast hits to 329 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 330; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 20212128

Basic gene information ( show / hide contents )

Locus AT1G09950 | Chromosome: 1 | Strand: -
Description transcription factor-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, flower, root, leaf; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: ZW2 (TAIR:AT1G58330.1); Has 330 Blast hits to 329 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 330; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Alias
RAS1( alias )
Gene model
AT1G09950.1 | From: 3240608 | To: 3241634
Sequence
AT1G09950.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
molecular_function_unknown PMID:
cellular_component
endomembrane system PMID:
biological_process
biological_process_unknown PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
Salk058470 20212128 mutant
RAS1OE 20212128 transgenic

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G09950.1 
length: 1027 
miRNA : ath-miR156a
length: 20 
 
mfe: -25.3 kcal/mol 
p-value: 0.018757 
 
position  310 
target 5' C  U              C C 
           GU UUCACUUUCUUCUG C  
           CA GAGUGAGAGAAGAC G  
miRNA  3'    C              A U 
 
 
target: AT1G09950.1 
length: 1027 
miRNA : ath-miR156b
length: 20 
 
mfe: -25.3 kcal/mol 
p-value: 0.015190 
 
position  310 
target 5' C  U              C C 
           GU UUCACUUUCUUCUG C  
           CA GAGUGAGAGAAGAC G  
miRNA  3'    C              A U 
 
 
target: AT1G09950.1 
length: 1027 
miRNA : ath-miR156c
length: 20 
 
mfe: -25.3 kcal/mol 
p-value: 0.013547 
 
position  310 
target 5' C  U              C C 
           GU UUCACUUUCUUCUG C  
           CA GAGUGAGAGAAGAC G  
miRNA  3'    C              A U 
 
 
target: AT1G09950.1 
length: 1027 
miRNA : ath-miR156d
length: 20 
 
mfe: -25.3 kcal/mol 
p-value: 0.015751 
 
position  310 
target 5' C  U              C C 
           GU UUCACUUUCUUCUG C  
           CA GAGUGAGAGAAGAC G  
miRNA  3'    C              A U 
 
 
target: AT1G09950.1 
length: 1027 
miRNA : ath-miR156e
length: 20 
 
mfe: -25.3 kcal/mol 
p-value: 0.016731 
 
position  310 
target 5' C  U              C C 
           GU UUCACUUUCUUCUG C  
           CA GAGUGAGAGAAGAC G  
miRNA  3'    C              A U 
 
 
target: AT1G09950.1 
length: 1027 
miRNA : ath-miR156f
length: 20 
 
mfe: -25.3 kcal/mol 
p-value: 0.015108 
 
position  310 
target 5' C  U              C C 
           GU UUCACUUUCUUCUG C  
           CA GAGUGAGAGAAGAC G  
miRNA  3'    C              A U 
 
 
target: AT1G09950.1 
length: 1027 
miRNA : ath-miR156g
length: 20 
 
mfe: -25.6 kcal/mol 
p-value: 0.012918 
 
position  310 
target 5' C  U              C C 
           GU UUCACUUUCUUCUG C  
           CA GAGUGAGAGAAGAC G  
miRNA  3'    C              A C 
 
 
target: AT1G09950.1 
length: 1027 
miRNA : ath-miR164a
length: 21 
 
mfe: -32.2 kcal/mol 
p-value: 0.001562 
 
position  802 
target 5' U     U               A 
           UGC U UGCUCUGCUUCUUCA  
           ACG G ACGGGACGAAGAGGU  
miRNA  3'     U C                 
 
 
target: AT1G09950.1 
length: 1027 
miRNA : ath-miR164b
length: 21 
 
mfe: -32.2 kcal/mol 
p-value: 0.003074 
 
position  802 
target 5' U     U               A 
           UGC U UGCUCUGCUUCUUCA  
           ACG G ACGGGACGAAGAGGU  
miRNA  3'     U C                 
 
 
target: AT1G09950.1 
length: 1027 
miRNA : ath-miR164c
length: 21 
 
mfe: -31.6 kcal/mol 
p-value: 0.004115 
 
position  803 
target 5' U    U               A 
           GC U UGCUCUGCUUCUUCA  
           CG G ACGGGACGAAGAGGU  
miRNA  3' G  U C                 
 
 
target: AT1G09950.1 
length: 1027 
miRNA : ath-miR396a
length: 21 
 
mfe: -24.5 kcal/mol 
p-value: 0.020226 
 
position  674 
target 5' A     G        G      A 
           CGG U GGGAAAGU GUGGAG  
           GUC A UUCUUUCG CACCUU  
miRNA  3'     A G        A        
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_51283
AccessionTaxon
NP_172466 ( AT1G09950 )Arabidopsis thaliana
NP_564730Arabidopsis thaliana
28176.m000269Ricinus communis
30170.m013626Ricinus communis
NP_001042845Oryza sativa Japonica Group

No related Cross Link information for this gene.