You are querying gene by "AT1G09400".

Locus: AT1G09400 Alias: AT1G09400

Hormone Evidence Function category Gene Description PMID
jasmonic acidGeneOntology - jasmonic acid biosynthetic process 10333582

Basic gene information ( show / hide contents )

Locus AT1G09400 | Chromosome: 1 | Strand: -
Description jasmonic acid biosynthetic process
Alias
AT1G09400( alias )
Gene model
AT1G09400.1 | From: 3033514 | To: 3035038
Sequence
AT1G09400.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
12-oxophytodienoate reductase activity PMID: 10333582
cellular_component
mitochondrion PMID:
biological_process
jasmonic acid biosynthetic process PMID: 10333582
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G09400.1 
length: 1182 
miRNA : ath-miR417
length: 21 
 
mfe: -24.7 kcal/mol 
p-value: 0.007319 
 
position  403 
target 5' A                   C G 
           UCGAAUGAGUUUAC ACCU C  
           AGCUUGUUUAAGUG UGGA G  
miRNA  3'                A    A   
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10658
AccessionTaxon
129245Chlamydomonas reinhardtii
NP_172411 ( AT1G09400 )Arabidopsis thaliana
31966.m000019Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.20.20.709.400030710309652E-1041324IPR013785Aldolase-type TIM barrel
PfamPF007247.200000000000026E-872323IPR001155NADH:flavin oxidoreductase/NADH oxidase, N-terminal