You are querying gene by "AT1G08810".

Locus: AT1G08810 Alias: AtMYB60

Hormone Evidence Function category Gene Description PMID
salicylic acidGeneOntology - response to salicylic acid stimulus 16463103
ethyleneGeneOntology - response to ethylene stimulus 16463103
abscisic acidGeneOntology - response to abscisic acid stimulus 16005291
auxinGeneOntology - response to auxin stimulus 16463103
gibberellinGeneOntology - response to gibberellin stimulus 16463103
jasmonic acidGeneOntology - response to jasmonic acid stimulus 16463103

Basic gene information ( show / hide contents )

Locus AT1G08810 | Chromosome: 1 | Strand: -
Description response to ethylene stimulus
Alias
AtMYB60( alias )
MYB60( alias )
Gene model
AT1G08810.2 | From: 2819071 | To: 2820023
AT1G08810.1 | From: 2819068 | To: 2820398
Sequence
AT1G08810.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G08810.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
transcription factor activity PMID: 16005291
biological_process
response to auxin stimulus PMID: 16463103
response to water deprivation PMID: 16005291
regulation of transcription, DNA-dependent PMID: 9839469
stomatal movement PMID: 16005291
response to light stimulus PMID: 16005291
response to gibberellin stimulus PMID: 16463103
response to jasmonic acid stimulus PMID: 16463103
response to ethylene stimulus PMID: 16463103
response to abscisic acid stimulus PMID: 16005291
response to salicylic acid stimulus PMID: 16463103
response to cadmium ion PMID: 16463103
response to salt stress PMID: 16463103
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G08810.1 
length: 1123 
miRNA : ath-miR847
length: 21 
 
mfe: -27.0 kcal/mol 
p-value: 0.013097 
 
position  40 
target 5' G   U          A   A  G 
           AUC AGAGGAAGAG GAG GA  
           UAG UCUUCUUCUC CUC CU  
miRNA  3' G   U              A    
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_51277
AccessionTaxon
NP_172358 ( AT1G08810 )Arabidopsis thaliana
NP_973795Arabidopsis thaliana
NP_001065636Oryza sativa Japonica Group
NP_001066042Oryza sativa Japonica Group
29818.m000395Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS512940.0133IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
SuperFamilySSF466892.3E-10363IPR009057Homeodomain-like
PANTHERPTHR106415.600049082908447E-1113264IPR015495Myb transcription factor
Gene3DG3DSA:1.10.10.601.100000298961487E-6533IPR012287Homeodomain-related
PANTHERPTHR106418.300014037915945E-365181IPR015495Myb transcription factor
PfamPF002490.0033529IPR014778Myb, DNA-binding
PROSITEPS512940.0965IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
Gene3DG3DSA:1.10.10.608.69999350765624E-151264IPR012287Homeodomain-related
SMARTSM007171.3999989204987804E-141363IPR001005SANT, DNA-binding
PfamPF002492.800000000000005E-121461IPR014778Myb, DNA-binding
SuperFamilySSF466893.4E-211483IPR009057Homeodomain-like
SMARTSM007172.3999979815726497E-1366114IPR001005SANT, DNA-binding
PROSITEPS512940.066116IPR017930HTH transcriptional regulator, Myb-type, DNA-binding
PfamPF002492.4E-967112IPR014778Myb, DNA-binding
Gene3DG3DSA:1.10.10.601.0999990912079224E-1568116IPR012287Homeodomain-related
SuperFamilySSF466897.0E-1286146IPR009057Homeodomain-like