You are querying gene by "AT1G08720".

Locus: AT1G08720 Alias: EDR1

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - response to ethylene stimulus 15894742

Basic gene information ( show / hide contents )

Locus AT1G08720 | Chromosome: 1 | Strand: +
Description response to ethylene stimulus
Alias
EDR1( alias )
Gene model
AT1G08720.1 | From: 2774033 | To: 2779300
Sequence
AT1G08720.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
MAP kinase kinase kinase activity PMID: 11114160
protein serine/threonine/tyrosine kinase activity PMID: 16429265
kinase activity PMID:
biological_process
MAPKKK cascade PMID: 11114160
response to fungus PMID: 11114160
response to water deprivation PMID: 15894742
cell death PMID: 15894742
response to ethylene stimulus PMID: 15894742
response to bacterium PMID: 16565218
protein amino acid autophosphorylation PMID: 12492839
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G08720.1 
length: 3081 
miRNA : ath-miR859
length: 21 
 
mfe: -24.0 kcal/mol 
p-value: 0.080245 
 
position  2373 
target 5' C     G G          U  A 
           UUGAC U GCAAUGGGGA GA  
           AACUG A UGUUGUCUCU CU  
miRNA  3' A     A G               
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_15602
AccessionTaxon
estExt_gwp_GeneWisePlus.C_Chr_12.00010034Ostreococcus tauri
NP_173254Arabidopsis thaliana
NP_177507Arabidopsis thaliana
NP_196746Arabidopsis thaliana
102541Chlamydomonas reinhardtii
NP_001046319Oryza sativa Japonica Group
NP_001048096Oryza sativa Japonica Group
NP_001057225Oryza sativa Japonica Group
29794.m003325Ricinus communis
NP_563824 ( AT1G08720 )Arabidopsis thaliana
NP_001049035Oryza sativa Japonica Group
NP_001064663Oryza sativa Japonica Group
30128.m008649Ricinus communis
113099Chlamydomonas reinhardtii
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF561123.8E-82658921IPR011009Protein kinase-like domain
PROSITEPS500110.0669925IPR000719Protein kinase, catalytic domain
PfamPF077146.099999999999957E-61670921IPR001245Serine-threonine/tyrosine-protein kinase
PROSITEPS001070.0675697IPR017441Protein kinase, ATP binding site
PROSITEPS001080.0788800IPR008271Serine/threonine-protein kinase, active site