You are querying gene by "AT1G07745".

Locus: AT1G07745 Alias: ATRAD51D

Hormone Evidence Function category Gene Description PMID
salicylic acidMutant Hormone signal transduction a member of RecA/Rad51 family of recombination and repair proteins 17360504

Basic gene information ( show / hide contents )

Locus AT1G07745 | Chromosome: 1 | Strand: -
Description a member of RecA/Rad51 family of recombination and repair proteins
Alias
ATRAD51D( alias )
RAD51D( alias )
SSN1( alias )
Gene model
AT1G07745.1 | From: 2400606 | To: 2402870
AT1G07745.2 | From: 2400586 | To: 2402870
Sequence
AT1G07745.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G07745.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID:
cellular_component
endomembrane system PMID:
biological_process
DNA repair PMID: 17360504
somatic cell DNA recombination PMID: 17360504
regulation of response to biotic stimulus PMID: 17360504
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   salicylic acid    ]

Genotype PMID Type
rad51d 17360504 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G07745.1 
length: 1188 
miRNA : ath-miR1888
length: 21 
 
mfe: -19.5 kcal/mol 
p-value: 0.057839 
 
position  435 
target 5' A    G   G       U     G 
           UCUU GCA AGUCUUG AUUUA  
           AGAA UGU UUAGAAU UGAAU  
miRNA  3' A    G                   
 
 
target: AT1G07745.2 
length: 1504 
miRNA : ath-miR1888
length: 21 
 
mfe: -19.5 kcal/mol 
p-value: 0.075544 
 
position  731 
target 5' A    G   G       U     G 
           UCUU GCA AGUCUUG AUUUA  
           AGAA UGU UUAGAAU UGAAU  
miRNA  3' A    G                   
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_16957
AccessionTaxon
NP_001077479Arabidopsis thaliana
NP_172254 ( AT1G07745 )Arabidopsis thaliana
fgenesh1_pg.C_Chr_12.0001000103Ostreococcus tauri
e_gw1.137.37.1Physcomitrella patens subsp. patens
29788.m000324Ricinus communis
NP_001062559Oryza sativa Japonica Group
170565Chlamydomonas reinhardtii
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS501620.067202IPR020588DNA recombination/repair protein RecA/RadB, ATP-binding domain
PfamPF084232.3000000000000007E-1769293IPR013632DNA recombination and repair protein Rad51, C-terminal
PROSITEPS5016214.97685220IPR020588DNA recombination/repair protein RecA/RadB, ATP-binding domain
PfamPF084233.5e-2087311IPR013632DNA recombination and repair protein Rad51, C-terminal
SMARTSM003820.00230000061930564788275IPR003593ATPase, AAA+ type, core