You are querying gene by "AT1G07530".

Locus: AT1G07530 Alias: SCL14

Hormone Evidence Function category Gene Description PMID
salicylic acidTransgenic Hormone signal transduction Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm. 18984675
Mutant Hormone signal transduction Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm. 18984675

Basic gene information ( show / hide contents )

Locus AT1G07530 | Chromosome: 1 | Strand: -
Description Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.
Alias
SCL14( alias )
Gene model
AT1G07530.1 | From: 2313579 | To: 2316466
Sequence
AT1G07530.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID: 11118137
cellular_component
cellular_component_unknown PMID:
biological_process
regulation of transcription PMID: 11118137
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   salicylic acid   ]

Genotype PMID Type
HA3-SCL14 18984675 transgenic
scl14 18984675 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G07530.1 
length: 2787 
miRNA : ath-miR833-5p
length: 22 
 
mfe: -25.9 kcal/mol 
p-value: 0.025498 
 
position  1566 
target 5' A   G                  C 
           GCU GGACCG GUACA CAGAU  
           UGA UCUGGC CAUGU GUUUG  
miRNA  3'            U     U     U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_19159
AccessionTaxon
NP_172232Arabidopsis thaliana
NP_180470Arabidopsis thaliana
27568.m000253Ricinus communis
28650.m000187Ricinus communis
28650.m000190Ricinus communis
28650.m000191Ricinus communis
29767.m000200Ricinus communis
NP_172233 ( AT1G07530 )Arabidopsis thaliana
e_gw1.181.25.1Physcomitrella patens subsp. patens
e_gw1.213.79.1Physcomitrella patens subsp. patens
e_gw1.359.29.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_3590028Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_840044Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_200045Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_98000013Physcomitrella patens subsp. patens
NP_181301Arabidopsis thaliana
NP_001044771Oryza sativa Japonica Group
NP_001050952Oryza sativa Japonica Group
NP_001067095Oryza sativa Japonica Group
28650.m000186Ricinus communis
28650.m000189Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS5098566.068367745IPR005202Transcription factor GRAS
PfamPF035141.1e-112393764IPR005202Transcription factor GRAS