You are querying gene by "AT1G06160".

Locus: AT1G06160 Alias: ORA59

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - ethylene mediated signaling pathway 9687012

Basic gene information ( show / hide contents )

Locus AT1G06160 | Chromosome: 1 | Strand: +
Description ethylene mediated signaling pathway
Alias
ORA59( alias )
Gene model
AT1G06160.1 | From: 1883003 | To: 1883933
Sequence
AT1G06160.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
DNA binding PMID: 10715325
transcription activator activity PMID: 10715325
transcription factor activity PMID: 10715325
cellular_component
nucleus PMID:
biological_process
ethylene mediated signaling pathway PMID: 9687012
regulation of transcription, DNA-dependent PMID: 10715325
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G06160.1 
length: 931 
miRNA : ath-miR854a
length: 21 
 
mfe: -30.4 kcal/mol 
p-value: 0.004736 
 
position  620 
target 5' C                A  U  U 
           CUCCUCCU CCUAUUC UC UC  
           GAGGAGGA GGAUAGG AG AG  
miRNA  3'          G          U    
 
 
target: AT1G06160.1 
length: 931 
miRNA : ath-miR854b
length: 21 
 
mfe: -30.4 kcal/mol 
p-value: 0.003331 
 
position  620 
target 5' C                A  U  U 
           CUCCUCCU CCUAUUC UC UC  
           GAGGAGGA GGAUAGG AG AG  
miRNA  3'          G          U    
 
 
target: AT1G06160.1 
length: 931 
miRNA : ath-miR854c
length: 21 
 
mfe: -30.4 kcal/mol 
p-value: 0.004205 
 
position  620 
target 5' C                A  U  U 
           CUCCUCCU CCUAUUC UC UC  
           GAGGAGGA GGAUAGG AG AG  
miRNA  3'          G          U    
 
 
target: AT1G06160.1 
length: 931 
miRNA : ath-miR854d
length: 21 
 
mfe: -30.4 kcal/mol 
p-value: 0.003479 
 
position  620 
target 5' C                A  U  U 
           CUCCUCCU CCUAUUC UC UC  
           GAGGAGGA GGAUAGG AG AG  
miRNA  3'          G          U    
 
 
target: AT1G06160.1 
length: 931 
miRNA : ath-miR854e
length: 21 
 
mfe: -30.4 kcal/mol 
p-value: 0.004423 
 
position  620 
target 5' C                A  U  U 
           CUCCUCCU CCUAUUC UC UC  
           GAGGAGGA GGAUAGG AG AG  
miRNA  3'          G          U    
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_51265
AccessionTaxon
NP_172106 ( AT1G06160 )Arabidopsis thaliana
NP_850162Arabidopsis thaliana
NP_001051973Oryza sativa Japonica Group
29584.m000234Ricinus communis
29680.m001678Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.30.730.101.2000011745813984E-2380142IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SuperFamilySSF541711.0E-2380142IPR016177DNA-binding, integrase-type
PfamPF008477.399999999999997E-1281131IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
SMARTSM003806.200014864426677E-3881145IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PROSITEPS510320.081139IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003671.3999989204987803E-108293IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding
PRINTSPR003671.3999989204987803E-10105121IPR001471Pathogenesis-related transcriptional factor/ERF, DNA-binding