You are querying gene by "AT1G05710".

Locus: AT1G05710 Alias: AT1G05710

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - response to ethylene stimulus

Basic gene information ( show / hide contents )

Locus AT1G05710 | Chromosome: 1 | Strand: +
Description response to ethylene stimulus
Alias
AT1G05710( alias )
Gene model
AT1G05710.1 | From: 1716021 | To: 1717274
AT1G05710.4 | From: 1715779 | To: 1717274
AT1G05710.2 | From: 1714949 | To: 1717269
AT1G05710.3 | From: 1714949 | To: 1717274
Sequence
AT1G05710.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G05710.4 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G05710.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G05710.3 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID: 12679534
cellular_component
nucleus PMID:
biological_process
response to ethylene stimulus PMID:
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G05710.1 
length: 878 
miRNA : ath-miR773
length: 21 
 
mfe: -24.5 kcal/mol 
p-value: 0.021673 
 
position  462 
target 5' C                   U 
           AGG AGGAGCUGG AGCAG  
           UCU UUUUCGACC UCGUU  
miRNA  3' C   G         U     U 
 
 
target: AT1G05710.2 
length: 1200 
miRNA : ath-miR773
length: 21 
 
mfe: -24.5 kcal/mol 
p-value: 0.030945 
 
position  789 
target 5' C                   U 
           AGG AGGAGCUGG AGCAG  
           UCU UUUUCGACC UCGUU  
miRNA  3' C   G         U     U 
 
 
target: AT1G05710.3 
length: 1140 
miRNA : ath-miR773
length: 21 
 
mfe: -24.5 kcal/mol 
p-value: 0.029235 
 
position  723 
target 5' C                   U 
           AGG AGGAGCUGG AGCAG  
           UCU UUUUCGACC UCGUU  
miRNA  3' C   G         U     U 
 
 
target: AT1G05710.4 
length: 767 
miRNA : ath-miR773
length: 21 
 
mfe: -24.5 kcal/mol 
p-value: 0.018437 
 
position  351 
target 5' C                   U 
           AGG AGGAGCUGG AGCAG  
           UCU UUUUCGACC UCGUU  
miRNA  3' C   G         U     U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_40837
AccessionTaxon
NP_180732Arabidopsis thaliana
NP_563746Arabidopsis thaliana
NP_849597Arabidopsis thaliana
NP_973764 ( AT1G05710 )Arabidopsis thaliana
NP_973765Arabidopsis thaliana
NP_001053182Oryza sativa Japonica Group
28405.m000015Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PROSITEPS508880.02677IPR001092Helix-loop-helix DNA-binding domain
PROSITEPS508880.02677IPR001092Helix-loop-helix DNA-binding domain
SMARTSM003530.0310000030991122443582IPR001092Helix-loop-helix DNA-binding domain
SMARTSM003530.0310000030991122443582IPR001092Helix-loop-helix DNA-binding domain
SuperFamilySSF474594.9E-84099IPR011598Helix-loop-helix DNA-binding
SuperFamilySSF474596.3E-94099IPR011598Helix-loop-helix DNA-binding