You are querying gene by "AT1G05630".

Locus: AT1G05630 Alias: 5PTASE13

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - response to abscisic acid stimulus 15574849

Basic gene information ( show / hide contents )

Locus AT1G05630 | Chromosome: 1 | Strand: +
Description response to abscisic acid stimulus
Alias
5PTASE13( alias )
AT5PTASE13( alias )
Gene model
AT1G05630.1 | From: 1682317 | To: 1687362
AT1G05630.2 | From: 1682446 | To: 1687353
Sequence
AT1G05630.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G05630.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
inositol or phosphatidylinositol phosphatase activity PMID: 15574849
biological_process
response to wounding PMID: 15574849
auxin homeostasis PMID: 16299182
response to abscisic acid stimulus PMID: 15574849
phloem or xylem histogenesis PMID: 16299182
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G05630.1 
length: 3888 
miRNA : ath-miR164a
length: 21 
 
mfe: -30.7 kcal/mol 
p-value: 0.018158 
 
position  212 
target 5' C  U           C     C 
           GC CGU CCCUGUU CUCCG  
           CG GCA GGGACGA GAGGU  
miRNA  3' A  U   C       A       
 
 
target: AT1G05630.1 
length: 3888 
miRNA : ath-miR164b
length: 21 
 
mfe: -30.7 kcal/mol 
p-value: 0.025447 
 
position  212 
target 5' C  U           C     C 
           GC CGU CCCUGUU CUCCG  
           CG GCA GGGACGA GAGGU  
miRNA  3' A  U   C       A       
 
 
target: AT1G05630.1 
length: 3888 
miRNA : ath-miR164c
length: 21 
 
mfe: -31.6 kcal/mol 
p-value: 0.015731 
 
position  211 
target 5' A   U           C     C 
           CGC CGU CCCUGUU CUCCG  
           GCG GCA GGGACGA GAGGU  
miRNA  3'     U   C       A       
 
 
target: AT1G05630.2 
length: 3648 
miRNA : ath-miR164a
length: 21 
 
mfe: -30.7 kcal/mol 
p-value: 0.016876 
 
position  83 
target 5' C  U           C     C 
           GC CGU CCCUGUU CUCCG  
           CG GCA GGGACGA GAGGU  
miRNA  3' A  U   C       A       
 
 
target: AT1G05630.2 
length: 3648 
miRNA : ath-miR164b
length: 21 
 
mfe: -30.7 kcal/mol 
p-value: 0.023894 
 
position  83 
target 5' C  U           C     C 
           GC CGU CCCUGUU CUCCG  
           CG GCA GGGACGA GAGGU  
miRNA  3' A  U   C       A       
 
 
target: AT1G05630.2 
length: 3648 
miRNA : ath-miR164c
length: 21 
 
mfe: -31.6 kcal/mol 
p-value: 0.014863 
 
position  82 
target 5' A   U           C     C 
           CGC CGU CCCUGUU CUCCG  
           GCG GCA GGGACGA GAGGU  
miRNA  3'     U   C       A       
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_11437
AccessionTaxon
30042.m000480Ricinus communis
NP_178299Arabidopsis thaliana
NP_181280Arabidopsis thaliana
NP_973622Arabidopsis thaliana
NP_001030976Arabidopsis thaliana
NP_172054 ( AT1G05630 )Arabidopsis thaliana
NP_176736Arabidopsis thaliana
NP_180742Arabidopsis thaliana
NP_181918Arabidopsis thaliana
NP_001062285Oryza sativa Japonica Group
NP_001063577Oryza sativa Japonica Group
e_gw1.242.3.1Physcomitrella patens subsp. patens
29929.m004504Ricinus communis
NP_001049499Oryza sativa Japonica Group
27936.m000053Ricinus communis
147252Chlamydomonas reinhardtii
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF509783.9e-23196579IPR011046WD40 repeat-like-containing domain
SuperFamilySSF509783.9e-23196579IPR011046WD40 repeat-like-containing domain
SMARTSM003202.9197235IPR001680WD40 repeat
SMARTSM003202.9197235IPR001680WD40 repeat
Gene3DG3DSA:2.130.10.101.1e-18207542IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.101.1e-18207542IPR015943WD40/YVTN repeat-like-containing domain
SMARTSM003200.25250288IPR001680WD40 repeat
SMARTSM003200.25250288IPR001680WD40 repeat
SMARTSM003202.5e+02427465IPR001680WD40 repeat
SMARTSM003202.5e+02427465IPR001680WD40 repeat
SMARTSM0032023467504IPR001680WD40 repeat
SMARTSM0032023467504IPR001680WD40 repeat
SuperFamilySSF562196e-89547947IPR005135Endonuclease/exonuclease/phosphatase
SuperFamilySSF562191.2e-87547981IPR005135Endonuclease/exonuclease/phosphatase
SMARTSM001287.9e-85569923IPR000300Inositol polyphosphate related phosphatase
SMARTSM001282.6e-72569957IPR000300Inositol polyphosphate related phosphatase
PfamPF033723.4e-68573915IPR005135Endonuclease/exonuclease/phosphatase
PfamPF033721.9e-66573949IPR005135Endonuclease/exonuclease/phosphatase