You are querying gene by "AT1G04610".

Locus: AT1G04610 Alias: YUC3

Hormone Evidence Function category Gene Description PMID
auxinGeneOntology - auxin biosynthetic process 11209081

Basic gene information ( show / hide contents )

Locus AT1G04610 | Chromosome: 1 | Strand: +
Description auxin biosynthetic process
Alias
YUC3( alias )
Gene model
AT1G04610.1 | From: 1279387 | To: 1281617
Sequence
AT1G04610.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
NADP binding PMID:
FAD binding PMID:
flavin-containing monooxygenase activity PMID:
oxidoreductase activity PMID:
biological_process
auxin biosynthetic process PMID: 11209081
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G04610.1 
length: 1737 
miRNA : ath-miR781
length: 21 
 
mfe: -21.5 kcal/mol 
p-value: 0.161011 
 
position  680 
target 5' G                   G 
           AAG GUCUAGAGGAUUUUG  
           UUC UAGGUCUUUUGAGAU  
miRNA  3' A   A               U 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_12899
AccessionTaxon
NP_171955 ( AT1G04610 )Arabidopsis thaliana
NP_180881Arabidopsis thaliana
NP_194980Arabidopsis thaliana
e_gw1.139.33.1Physcomitrella patens subsp. patens
e_gw1.204.26.1Physcomitrella patens subsp. patens
e_gw1.37.68.1Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_11000006Physcomitrella patens subsp. patens
fgenesh1_pm.scaffold_22000038Physcomitrella patens subsp. patens
29904.m003041Ricinus communis
30204.m001831Ricinus communis
NP_196693Arabidopsis thaliana
NP_850808Arabidopsis thaliana
NP_001043702Oryza sativa Japonica Group
NP_175321Arabidopsis thaliana
NP_171914Arabidopsis thaliana
NP_194601Arabidopsis thaliana
NP_199202Arabidopsis thaliana
NP_001052088Oryza sativa Japonica Group
30093.m000370Ricinus communis
29848.m004706Ricinus communis
NP_001049048Oryza sativa Japonica Group
NP_001042455Oryza sativa Japonica Group
NP_001059508Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PRINTSPR003681.29999924468179E-103658IPR013027FAD-dependent pyridine nucleotide-disulphide oxidoreductase
PRINTSPR004691.1999998570310131E-83658IPR000103Pyridine nucleotide-disulphide oxidoreductase, class-II
PfamPF007438.899999999999943E-2439358IPR020946Flavin-containing monooxygenase-like
PRINTSPR003681.29999924468179E-10166175IPR013027FAD-dependent pyridine nucleotide-disulphide oxidoreductase
PRINTSPR004691.1999998570310131E-8203227IPR000103Pyridine nucleotide-disulphide oxidoreductase, class-II
PRINTSPR003681.29999924468179E-10207232IPR013027FAD-dependent pyridine nucleotide-disulphide oxidoreductase