You are querying gene by "AT1G04580".

Locus: AT1G04580 Alias: AAO4

Hormone Evidence Function category Gene Description PMID
abscisic acidGeneOntology - abscisic acid biosynthetic process 10972874

Basic gene information ( show / hide contents )

Locus AT1G04580 | Chromosome: 1 | Strand: -
Description abscisic acid biosynthetic process
Alias
AAO4( alias )
ATAO-4( alias )
ATAO2( alias )
Gene model
AT1G04580.1 | From: 1252121 | To: 1257509
Sequence
AT1G04580.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
aldehyde oxidase activity PMID:
cellular_component
cellular_component_unknown PMID:
biological_process
abscisic acid biosynthetic process PMID: 10972874
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G04580.1 
length: 4104 
miRNA : ath-miR2112-3p
length: 21 
 
mfe: -27.4 kcal/mol 
p-value: 0.012420 
 
position  2613 
target 5' A G U                U 
           G G CAGAUGUGGAUGUAAG  
           C C GUUUACGCCUAUAUUU  
miRNA  3' A G                  C 
 
 
target: AT1G04580.1 
length: 4104 
miRNA : ath-miR776
length: 21 
 
mfe: -21.9 kcal/mol 
p-value: 0.176181 
 
position  516 
target 5' C      G U              C 
           GAUGUC A AUAGAGGAUUUGGG  
           UUGUAG U UAUCUUCUGAAUCU  
miRNA  3'                           
 
 
target: AT1G04580.1 
length: 4104 
miRNA : ath-miR832-5p
length: 21 
 
mfe: -28.9 kcal/mol 
p-value: 0.034070 
 
position  3917 
target 5' G      G  A            A 
           UUUUGA UU CCGGUUCCAGCG  
           AAAGCU AG GGCUAGGGUCGU  
miRNA  3'        A                 
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10289
AccessionTaxon
NP_195215Arabidopsis thaliana
NP_195216Arabidopsis thaliana
117669Chlamydomonas reinhardtii
NP_001050420Oryza sativa Japonica Group
estExt_fgenesh1_pg.C_3360042Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_440069Physcomitrella patens subsp. patens
30169.m006431Ricinus communis
NP_001077966Arabidopsis thaliana
NP_180283Arabidopsis thaliana
NP_189946Arabidopsis thaliana
NP_563711 ( AT1G04580 )Arabidopsis thaliana
NP_568407Arabidopsis thaliana
NP_851049Arabidopsis thaliana
NP_001051517Oryza sativa Japonica Group
NP_001051518Oryza sativa Japonica Group
NP_001058964Oryza sativa Japonica Group
NP_001059379Oryza sativa Japonica Group
NP_001064133Oryza sativa Japonica Group
e_gw1.170.7.1Physcomitrella patens subsp. patens
estExt_fgenesh1_pm.C_930001Physcomitrella patens subsp. patens
29854.m001093Ricinus communis
29854.m001095Ricinus communis
29854.m001100Ricinus communis
29976.m000486Ricinus communis
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.10.20.301.1000015067164284E-29187IPR012675Beta-grasp fold, ferredoxin-type
PIRPIRSF0001270.011337IPR016208Aldehyde oxidase/xanthine dehydrogenase
SuperFamilySSF542928.2E-26392IPR001041Ferredoxin
PROSITEPS510850.0491IPR001041Ferredoxin
PfamPF001116.59999999999999E-5976IPR001041Ferredoxin
PROSITEPS001970.04351IPR0060582Fe-2S ferredoxin, iron-sulphur binding site
PfamPF017992.900000000000006E-1787168IPR002888[2Fe-2S]-binding
SuperFamilySSF477411.6E-3594211IPR002888[2Fe-2S]-binding
SuperFamilySSF561769.5E-45189405IPR016166FAD-binding, type 2
PROSITEPS513870.0225409IPR016166FAD-binding, type 2
PfamPF009419.600000000000034E-38229407IPR002346Molybdopterin dehydrogenase, FAD-binding
Gene3DG3DSA:3.30.465.101.2999992446818318E-19287407IPR016169CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
Gene3DG3DSA:3.30.390.508.599997204827164E-6412531IPR005107CO dehydrogenase flavoprotein, C-terminal
SuperFamilySSF554477.9E-13414534IPR005107CO dehydrogenase flavoprotein, C-terminal
PfamPF034507.000000000000003E-14419524IPR005107CO dehydrogenase flavoprotein, C-terminal
Gene3DG3DSA:3.90.1170.501.299999244681832E-28547690IPR000674Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead
SuperFamilySSF546651.2E-38556696IPR000674Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead
PfamPF013151.4999999999999958E-28581690IPR000674Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead
SuperFamilySSF560030.06941329IPR008274Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding
PfamPF027380.07021240IPR008274Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding
Gene3DG3DSA:3.30.365.107.499996058513585E-29746840IPR008274Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding
Gene3DG3DSA:3.30.365.101.1000015067164283E-489171285IPR008274Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding