You are querying gene by "AT1G04250".

Locus: AT1G04250 Alias: AXR3

Hormone Evidence Function category Gene Description PMID
auxinMutant Hormone signal transduction 8811856
GeneOntology - response to auxin stimulus 17919906

Basic gene information ( show / hide contents )

Locus AT1G04250 | Chromosome: 1 | Strand: +
Description
Alias
AXR3( alias )
IAA17( alias )
Gene model
AT1G04250.1 | From: 1136257 | To: 1138612
Sequence
AT1G04250.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID: 11118137
cellular_component
nucleus PMID: 15994909
proteasome complex PMID: 15994909
signalosome PMID: 15994909
SCF ubiquitin ligase complex PMID: 15994909
biological_process
response to auxin stimulus PMID: 17919906
auxin mediated signaling pathway PMID: 11283339
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
axr3-1 8811856 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G04250.1 
length: 1087 
miRNA : ath-miR847
length: 21 
 
mfe: -27.6 kcal/mol 
p-value: 0.010413 
 
position  580 
target 5' A   G          A   A   U 
           CAU GAGGAGAAGA GGA UGA  
           GUA UUCUUCUUCU CCU ACU  
miRNA  3'     G              C     
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_25707
AccessionTaxon
NP_171921 ( AT1G04250 )Arabidopsis thaliana
NP_193191Arabidopsis thaliana
NP_187124Arabidopsis thaliana
NP_001067209Oryza sativa Japonica Group
29598.m000460Ricinus communis
NP_188945Arabidopsis thaliana
NP_974355Arabidopsis thaliana
estExt_Genewise1.C_1840013Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_730007Physcomitrella patens subsp. patens
NP_001043847Oryza sativa Japonica Group
NP_001056300Oryza sativa Japonica Group
NP_001051230Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF023099.600000000000035E-837221IPR003311AUX/IAA protein
PROSITEPS509620.0111212IPR011525Aux/IAA-ARF-dimerisation