You are querying gene by "AT1G04120".

Locus: AT1G04120 Alias: ATMRP5

Hormone Evidence Function category Gene Description PMID
abscisic acidMutant Hormone signal transduction member of MRP subfamily 19797057

Basic gene information ( show / hide contents )

Locus AT1G04120 | Chromosome: 1 | Strand: -
Description member of MRP subfamily
Alias
ATMRP5( alias )
MRP5( alias )
Gene model
AT1G04120.1 | From: 1064453 | To: 1070926
Sequence
AT1G04120.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
ATPase activity, coupled to transmembrane movement of substances PMID: 11346655
sulfonylurea receptor activity PMID: 14684837
cellular_component
vacuolar membrane PMID: 16618929
biological_process
cellular potassium ion homeostasis PMID: 14684837
response to salt stress PMID: 14684837
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   abscisic acid   ]

Genotype PMID Type
mrp5-1 19797057 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G04120.1 
length: 5277 
miRNA : ath-miR157d
length: 20 
 
mfe: -24.1 kcal/mol 
p-value: 0.042333 
 
position  427 
target 5' U  U          G     U 
           UG CUUUCUAUUU CUGUC  
           AC GAGAGAUAGA GACAG  
miRNA  3' C             A     U 
 
 
target: AT1G04120.1 
length: 5277 
miRNA : ath-miR854a
length: 21 
 
mfe: -28.9 kcal/mol 
p-value: 0.050488 
 
position  183 
target 5' U      A            U  U 
           CUUCUC UUCUCUAUCUUC UC  
           GAGGAG GAGGGAUAGGAG AG  
miRNA  3'                     U    
 
 
target: AT1G04120.1 
length: 5277 
miRNA : ath-miR854b
length: 21 
 
mfe: -28.9 kcal/mol 
p-value: 0.055297 
 
position  183 
target 5' U      A            U  U 
           CUUCUC UUCUCUAUCUUC UC  
           GAGGAG GAGGGAUAGGAG AG  
miRNA  3'                     U    
 
 
target: AT1G04120.1 
length: 5277 
miRNA : ath-miR854c
length: 21 
 
mfe: -28.9 kcal/mol 
p-value: 0.054191 
 
position  183 
target 5' U      A            U  U 
           CUUCUC UUCUCUAUCUUC UC  
           GAGGAG GAGGGAUAGGAG AG  
miRNA  3'                     U    
 
 
target: AT1G04120.1 
length: 5277 
miRNA : ath-miR854d
length: 21 
 
mfe: -28.9 kcal/mol 
p-value: 0.055213 
 
position  183 
target 5' U      A            U  U 
           CUUCUC UUCUCUAUCUUC UC  
           GAGGAG GAGGGAUAGGAG AG  
miRNA  3'                     U    
 
 
target: AT1G04120.1 
length: 5277 
miRNA : ath-miR854e
length: 21 
 
mfe: -28.9 kcal/mol 
p-value: 0.055536 
 
position  183 
target 5' U      A            U  U 
           CUUCUC UUCUCUAUCUUC UC  
           GAGGAG GAGGGAUAGGAG AG  
miRNA  3'                     U    
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_10027
AccessionTaxon
NP_001031116Arabidopsis thaliana
NP_171908 ( AT1G04120 )Arabidopsis thaliana
NP_174329Arabidopsis thaliana
NP_174330Arabidopsis thaliana
NP_174331Arabidopsis thaliana
NP_178811Arabidopsis thaliana
NP_181013Arabidopsis thaliana
NP_182301Arabidopsis thaliana
NP_187915Arabidopsis thaliana
NP_187916Arabidopsis thaliana
NP_187917Arabidopsis thaliana
NP_188762Arabidopsis thaliana
NP_191473Arabidopsis thaliana
NP_191575Arabidopsis thaliana
NP_191656Arabidopsis thaliana
NP_191829Arabidopsis thaliana
NP_850575Arabidopsis thaliana
NP_974299Arabidopsis thaliana
NP_974300Arabidopsis thaliana
134058Chlamydomonas reinhardtii
190380Chlamydomonas reinhardtii
54676Chlamydomonas reinhardtii
NP_001042159Oryza sativa Japonica Group
NP_001043000Oryza sativa Japonica Group
NP_001046583Oryza sativa Japonica Group
NP_001046585Oryza sativa Japonica Group
NP_001048934Oryza sativa Japonica Group
NP_001052251Oryza sativa Japonica Group
NP_001052252Oryza sativa Japonica Group
NP_001053695Oryza sativa Japonica Group
NP_001053696Oryza sativa Japonica Group
NP_001053904Oryza sativa Japonica Group
NP_001054864Oryza sativa Japonica Group
NP_001056870Oryza sativa Japonica Group
NP_001065790Oryza sativa Japonica Group
NP_001067031Oryza sativa Japonica Group
e_gw1.03.00.16.1Ostreococcus tauri
e_gw1.07.00.6.1Ostreococcus tauri
e_gw1.121.4.1Physcomitrella patens subsp. patens
e_gw1.136.12.1Physcomitrella patens subsp. patens
e_gw1.21.192.1Physcomitrella patens subsp. patens
e_gw1.227.2.1Physcomitrella patens subsp. patens
estExt_Genewise1.C_1220086Physcomitrella patens subsp. patens
estExt_Genewise1.C_2230056Physcomitrella patens subsp. patens
estExt_Genewise1.C_2930039Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_1420018Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1050058Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2240079Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_3520041Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_518000010Physcomitrella patens subsp. patens
fgenesh1_pm.scaffold_540000001Physcomitrella patens subsp. patens
28694.m000689Ricinus communis
29337.m000213Ricinus communis
29337.m000214Ricinus communis
29637.m000727Ricinus communis
29929.m004739Ricinus communis
29932.m000603Ricinus communis
29932.m000604Ricinus communis
29986.m001594Ricinus communis
30131.m006854Ricinus communis
30169.m006551Ricinus communis
30869.m000035Ricinus communis
29983.m003220Ricinus communis
143900Chlamydomonas reinhardtii
29337.m000216Ricinus communis
141872Chlamydomonas reinhardtii
e_gw1.402.38.1Physcomitrella patens subsp. patens
NP_001056996Oryza sativa Japonica Group
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SuperFamilySSF901231.2E-44289633IPR011527ABC transporter, transmembrane domain, type 1
PfamPF006643.7999999999999984E-32311576IPR001140ABC transporter, transmembrane domain
PROSITEPS509290.0311588IPR017940ABC transporter integral membrane type 1
PROSITEPS508930.0622845IPR003439ABC transporter-like
SMARTSM003821.5999988934925163E-14649822IPR003593ATPase, AAA+ type, core
PfamPF000054.4000000000000055E-11664774IPR003439ABC transporter-like
PROSITEPS002110.0747761IPR017871ABC transporter, conserved site
SuperFamilySSF901234.7E-569071250IPR011527ABC transporter, transmembrane domain, type 1
PROSITEPS509290.09511221IPR017940ABC transporter integral membrane type 1
PfamPF006641.3000000000000007E-249531211IPR001140ABC transporter, transmembrane domain
PROSITEPS508930.012681502IPR003439ABC transporter-like
SMARTSM003822.7000018358079412E-1412941479IPR003593ATPase, AAA+ type, core
PfamPF000051.1E-1813091433IPR003439ABC transporter-like