You are querying gene by "AT1G01480".

Locus: AT1G01480 Alias: ACS2

Hormone Evidence Function category Gene Description PMID
ethyleneGeneOntology - ethylene biosynthetic process 16311726

Basic gene information ( show / hide contents )

Locus AT1G01480 | Chromosome: 1 | Strand: +
Description ethylene biosynthetic process
Alias
ACS2( alias )
AT-ACC2( alias )
Gene model
AT1G01480.1 | From: 175782 | To: 178400
AT1G01480.2 | From: 176141 | To: 178400
Sequence
AT1G01480.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
AT1G01480.2 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
1-aminocyclopropane-1-carboxylate synthase activity PMID: 12968022
cellular_component
cellular_component_unknown PMID:
biological_process
ethylene biosynthetic process PMID: 16311726
KEGG pathway This gene participates in 1 pathways:
Pathway Enzyme
Propanoate metabolism 1-aminocyclopropane-1-carboxylate synthase
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

No genetic evidence yet supported that this is a hormone-related gene.

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G01480.1 
length: 1920 
miRNA : ath-miR1886.2
length: 21 
 
mfe: -22.7 kcal/mol 
p-value: 0.015461 
 
position  1370 
target 5' A G    C          G  U 
           C GAUC AAGAUUUCGU UC  
           G UUAG UUCUAAAGUA AG  
miRNA  3'   G    U          G  U 
 
 
target: AT1G01480.1 
length: 1920 
miRNA : ath-miR394a
length: 20 
 
mfe: -27.9 kcal/mol 
p-value: 0.018439 
 
position  561 
target 5' A  U  C              G 
           GG GG GGACAGG UGUCGA  
           CC CC CCUGUCU ACGGUU  
miRNA  3'    U  A       U        
 
 
target: AT1G01480.1 
length: 1920 
miRNA : ath-miR394b
length: 20 
 
mfe: -27.9 kcal/mol 
p-value: 0.012918 
 
position  561 
target 5' A  U  C              G 
           GG GG GGACAGG UGUCGA  
           CC CC CCUGUCU ACGGUU  
miRNA  3'    U  A       U        
 
 
target: AT1G01480.1 
length: 1920 
miRNA : ath-miR396a
length: 21 
 
mfe: -26.6 kcal/mol 
p-value: 0.015597 
 
position  1085 
target 5' A  C                 U 
           AG UCGAGAAGGUUG GGGA  
           UC AGUUCUUUCGAC CCUU  
miRNA  3' G  A            A      
 
 
target: AT1G01480.1 
length: 1920 
miRNA : ath-miR396b
length: 21 
 
mfe: -26.8 kcal/mol 
p-value: 0.011118 
 
position  1084 
target 5' A   C                 U 
           AAG UCGAGAAGGUUG GGGA  
           UUC AGUUCUUUCGAC CCUU  
miRNA  3'     A            A      
 
 
target: AT1G01480.2 
length: 1735 
miRNA : ath-miR1886.2
length: 21 
 
mfe: -22.7 kcal/mol 
p-value: 0.013410 
 
position  1185 
target 5' A G    C          G  U 
           C GAUC AAGAUUUCGU UC  
           G UUAG UUCUAAAGUA AG  
miRNA  3'   G    U          G  U 
 
 
target: AT1G01480.2 
length: 1735 
miRNA : ath-miR394a
length: 20 
 
mfe: -27.9 kcal/mol 
p-value: 0.016777 
 
position  376 
target 5' A  U  C              G 
           GG GG GGACAGG UGUCGA  
           CC CC CCUGUCU ACGGUU  
miRNA  3'    U  A       U        
 
 
target: AT1G01480.2 
length: 1735 
miRNA : ath-miR394b
length: 20 
 
mfe: -27.9 kcal/mol 
p-value: 0.011401 
 
position  376 
target 5' A  U  C              G 
           GG GG GGACAGG UGUCGA  
           CC CC CCUGUCU ACGGUU  
miRNA  3'    U  A       U        
 
 
target: AT1G01480.2 
length: 1735 
miRNA : ath-miR396a
length: 21 
 
mfe: -26.6 kcal/mol 
p-value: 0.013855 
 
position  900 
target 5' A  C                 U 
           AG UCGAGAAGGUUG GGGA  
           UC AGUUCUUUCGAC CCUU  
miRNA  3' G  A            A      
 
 
target: AT1G01480.2 
length: 1735 
miRNA : ath-miR396b
length: 21 
 
mfe: -26.8 kcal/mol 
p-value: 0.009708 
 
position  899 
target 5' A   C                 U 
           AAG UCGAGAAGGUUG GGGA  
           UUC AGUUCUUUCGAC CCUU  
miRNA  3'     A            A      
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_12167
AccessionTaxon
NP_564804Arabidopsis thaliana
170056Chlamydomonas reinhardtii
NP_001056689Oryza sativa Japonica Group
e_gw1.08.00.217.1Ostreococcus tauri
estExt_gwp_gw1.C_2350048Physcomitrella patens subsp. patens
30147.m014167Ricinus communis
30190.m011061Ricinus communis
NP_171655 ( AT1G01480 )Arabidopsis thaliana
NP_191710Arabidopsis thaliana
30174.m008659Ricinus communis
30190.m011272Ricinus communis
NP_194350Arabidopsis thaliana
NP_849572Arabidopsis thaliana
NP_179866Arabidopsis thaliana
NP_190539Arabidopsis thaliana
NP_195491Arabidopsis thaliana
NP_201381Arabidopsis thaliana
NP_001051142Oryza sativa Japonica Group
29825.m000323Ricinus communis
30170.m013658Ricinus communis
NP_567330Arabidopsis thaliana
NP_192867Arabidopsis thaliana
NP_001053637Oryza sativa Japonica Group
NP_001042279Oryza sativa Japonica Group
29912.m005403Ricinus communis
NP_199982Arabidopsis thaliana
e_gw1.376.41.1Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_46000126Physcomitrella patens subsp. patens
DatabaseEntry IDE-valueStartEndInterPro IDDescription
Gene3DG3DSA:3.40.640.103.700010635372355E-581219IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
SuperFamilySSF533831.6E-861331IPR015424Pyridoxal phosphate-dependent transferase, major domain
PfamPF001553.7000000000000425E-905326IPR004839Aminotransferase, class I/classII
SuperFamilySSF533831.7e-10311437IPR015424Pyridoxal phosphate-dependent transferase, major domain
PRINTSPR007531.900006943152612E-811535IPR0011761-aminocyclopropane-1-carboxylate synthase
PRINTSPR007531.900006943152612E-813758IPR0011761-aminocyclopropane-1-carboxylate synthase
PfamPF001556.3e-10849432IPR004839Aminotransferase, class I/classII
PRINTSPR007535.2e-1055177IPR0011761-aminocyclopropane-1-carboxylate synthase
Gene3DG3DSA:3.40.640.106.9e-6971325IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
PRINTSPR007535.2e-10584100IPR0011761-aminocyclopropane-1-carboxylate synthase
PRINTSPR007531.900006943152612E-8191115IPR0011761-aminocyclopropane-1-carboxylate synthase
PRINTSPR007535.2e-105121141IPR0011761-aminocyclopropane-1-carboxylate synthase
PRINTSPR007531.900006943152612E-81127150IPR0011761-aminocyclopropane-1-carboxylate synthase
PRINTSPR007535.2e-105143164IPR0011761-aminocyclopropane-1-carboxylate synthase
PRINTSPR007531.900006943152612E-81164188IPR0011761-aminocyclopropane-1-carboxylate synthase
PROSITEPS001050.0170183IPR004838Aminotransferases, class-I, pyridoxal-phosphate-binding site
PRINTSPR007531.900006943152612E-81196219IPR0011761-aminocyclopropane-1-carboxylate synthase
PRINTSPR007535.2e-105197221IPR0011761-aminocyclopropane-1-carboxylate synthase
Gene3DG3DSA:3.90.1150.103.499998511489222E-6224336IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2
PRINTSPR007535.2e-105233256IPR0011761-aminocyclopropane-1-carboxylate synthase
PRINTSPR007535.2e-105270294IPR0011761-aminocyclopropane-1-carboxylate synthase
PROSITEPS00105NA276289IPR004838Aminotransferases, class-I, pyridoxal-phosphate-binding site
PRINTSPR007535.2e-105302325IPR0011761-aminocyclopropane-1-carboxylate synthase
Gene3DG3DSA:3.90.1150.103.3e-06330442IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2