You are querying gene by "AT1G01030".

Locus: AT1G01030 Alias: NGA3

Hormone Evidence Function category Gene Description PMID
auxinTransgenic Hormone signal transduction NGATHA3 (NGA3); FUNCTIONS IN: transcription factor activity; INVOLVED IN: flower development, leaf development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: NGA1 (NGATHA1); transcription factor (TAIR:AT2G46870.1); Has 730 Blast hits to 729 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 730; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 19435937
Mutant Hormone signal transduction NGATHA3 (NGA3); FUNCTIONS IN: transcription factor activity; INVOLVED IN: flower development, leaf development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: NGA1 (NGATHA1); transcription factor (TAIR:AT2G46870.1); Has 730 Blast hits to 729 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 730; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 19435937

Basic gene information ( show / hide contents )

Locus AT1G01030 | Chromosome: 1 | Strand: -
Description NGATHA3 (NGA3); FUNCTIONS IN: transcription factor activity; INVOLVED IN: flower development, leaf development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: NGA1 (NGATHA1); transcription factor (TAIR:AT2G46870.1); Has 730 Blast hits to 729 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 730; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Alias
NGA3( alias )
Gene model
AT1G01030.1 | From: 11649 | To: 13714
Sequence
AT1G01030.1 | Genomic | cDNA | CDS | Protein | Upstream 1K | Downstream 1K
Gene Ontology
molecular_function
transcription factor activity PMID: 11118137
cellular_component
cellular_component_unknown PMID:
biological_process
flower development PMID: 16603651
regulation of transcription PMID: 11118137
leaf development PMID: 16603651
KEGG pathway No data
PPI Get protein-protein interactions by Arabidopsis Interactions Viewer

Hormone-related mutants or transgenic plants associated with this gene

[   auxin   ]

Genotype PMID Type
amiR-NGA 19435937 transgenic
nga1 nga2 nga3 nga4 19435937 mutant

Microarray data for this gene

  1  
Hormone treatment related datasets  
  2  
Abiotic stress treatment related datasets (in root)  
  3  
Abiotic stress treatment related datasets (in shoot)  
  4  
Development related datasets  

miRNA interaction information for this gene

Detail
(Note:target use cDNA sequence)
target: AT1G01030.1 
length: 1905 
miRNA : ath-miR414
length: 21 
 
mfe: -32.8 kcal/mol 
p-value: 0.000256 
 
position  1614 
target 5' A               C     U 
           UGAUGGUGAUGAUGG GAUGA  
           ACUGCUACUACUACU CUACU  
miRNA  3'                 U       
 
 

No related Gene interaction information for this gene.

Ortholog Groups annotation for this gene

Ortholog Groups : OG4_37260
AccessionTaxon
NP_171611 ( AT1G01030 )Arabidopsis thaliana
NP_192059Arabidopsis thaliana
NP_566089Arabidopsis thaliana
NP_001047754Oryza sativa Japonica Group
NP_001048792Oryza sativa Japonica Group
30068.m002615Ricinus communis
30076.m004471Ricinus communis
NP_191756Arabidopsis thaliana
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF023621.8e-2956159IPR003340Transcriptional factor B3
PROSITEPS5086314.74856162IPR003340Transcriptional factor B3